Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120882g00011 ATGAGTTTTTGTATGGGCGATAAGGTTTGGGTCAAGGATAGCCTTGATGCTTGGATACCTGCTGAAGTTGTTGACTCCGGCAGTGGCCGCGGAGTCAACAGTGGTCGTATTCAGCTCTTGATTGACTCCGGCAAGAAGGTTTTTGCTACAGCGGATGAGCTGTTTCCGCGGGACGCAGATGAAGAAGAGCATGGTGGAGTTGAAGACATGACTAGGCTGGTTTTCTTGAATGAGCCTGAGGTGTTGTACAATCTTCGAAGGAGATATGCTCTCCATGATATCTATGTGAGTCACAGGGTTAAATTTAATGGAACTGATTATTATTTTCTCTGGATGTTCAAAATAATGAGTTTGGTTGAGAGTTTAGGCATTTGGAATAAGATAGAGGATGTTTGGTAA 399 0.4361 MSFCMGDKVWVKDSLDAWIPAEVVDSGSGRGVNSGRIQLLIDSGKKVFATADELFPRDADEEEHGGVEDMTRLVFLNEPEVLYNLRRRYALHDIYVSHRVKFNGTDYYFLWMFKIMSLVESLGIWNKIEDVW 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120882g00011 132 Gene3D Kinesin motor domain 8 103 IPR036961 -
Stsc120882g00011 132 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Stsc120882g00011 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 95 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120882g00011 Stsc-Chr120882 89732 90475 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120882g00011 6 95 Myosins gene family AT4G33200 53.333 1.09e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120882g00011 K10357 - vum:124845124 123.635