Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120879g00011 ATGGAGGTGATTATTAGAAGCAAAAGCCTCAAGTCTTTGGTGACAAAGGTTGTTAAAGGTCTTGCATTCTTGGCCCTAAGTAGAAGAAGGGCTTATCCCATTTGTGACATCAACGACGACAATGATGACGGCCGCAGTGACGAAGAAGTTACTACATCGGTGCCAAAAGGGCATTTTGCGGTTATAGCAATGAAGGGTGGCGATGACGACGAAGAAGAGGAGAAGAGGAGGTTCATGGTTGAATTGGATTATTTGAACGATCCTGCGTTCTTGAAGCTTCTGGAGATGGCTAAGGAAGAATATGGATTTCAACACAAAGGTGCTCTTGCTCTTCCATGCACACCTCAACAACTTCGCAACATTTTACACAATCATCAATTGTAA 384 0.4349 MEVIIRSKSLKSLVTKVVKGLAFLALSRRRAYPICDINDDNDDGRSDEEVTTSVPKGHFAVIAMKGGDDDEEEEKRRFMVELDYLNDPAFLKLLEMAKEEYGFQHKGALALPCTPQQLRNILHNHQL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120879g00011 127 Pfam Auxin responsive protein 39 122 IPR003676 GO:0009733
Stsc120879g00011 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120879g00011 Stsc-Chr120879 80891 81384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120879g00011 44 113 Calmodulin-binding Proteins AT4G34750 41.429 1.58e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120879g00011 - K14488 gmx:102661602 112.849