Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120878g00010 ATGGGTATTCGCATGCCGTTTATGGTGCTCCAAGCAAAGCAGATATTCAAGTCAACATCACAGCATCTTCAAGGTGGAAACCAGTCAAGTGTTGTTCCAAAGGGACACATAGCAGTGTATGTTGGAGAGTTGCAGAAGAAGCGCTTTGTGGTTCCAATATCATACTTGAGTCATCCTTTGTTTGTTGACTTGCTAGATAGAGCAGAGGAAGAGTTTGGATTCAACCCTCCAATGGGAGGACTCACAATTCCATGCAAAGAAGATGCATTCATCAACCTTACCTATCAGCTCCGTGCTTTGTGA 303 0.4389 MGIRMPFMVLQAKQIFKSTSQHLQGGNQSSVVPKGHIAVYVGELQKKRFVVPISYLSHPLFVDLLDRAEEEFGFNPPMGGLTIPCKEDAFINLTYQLRAL 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120878g00010 100 Pfam Auxin responsive protein 13 93 IPR003676 GO:0009733
Stsc120878g00010 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120878g00010 Stsc-Chr120878 57734 58354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120878g00010 18 90 Calmodulin-binding Proteins AT5G20810 50.685 8.23e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120878g00010 K14488 - gmx:100803474 145.976