Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120878g00009 ATGATGATCCAACATGCAAAGCAAATTCTACGATTGAGGTCTCATCATCATCATCGTAATTTTGCAAATAACAATTCAAAGAAAATTGATGATGTTCCAAAAGGGCACTTTGCGGTGTATGTGGGAGATGAAGATAACAATATGAAGCGATTTGTGGTTCCTATTTCATACTTGAAGCAACCAATGTTCCAAGCTTTGTTGAAACGTTCTGAAGATGAATTTGGCTTTGACCAACCAATTATGGGGAATCATCATCTTCTTATTCCTTGTCCTGTTGATCATTTTCTTAGTCTCACTTCTCGAATCACCAACAACTAG 318 0.3679 MMIQHAKQILRLRSHHHHRNFANNNSKKIDDVPKGHFAVYVGDEDNNMKRFVVPISYLKQPMFQALLKRSEDEFGFDQPIMGNHHLLIPCPVDHFLSLTSRITNN 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120878g00009 105 Pfam Auxin responsive protein 7 101 IPR003676 GO:0009733
Stsc120878g00009 105 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 22 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120878g00009 Stsc-Chr120878 53284 53603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120878g00009 31 105 Calmodulin-binding Proteins AT5G20810 48.000 7.42e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120878g00009 K14488 - cam:101505472 119.012