Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120878g00008 ATGGCTTTCCGCATACCAGGTATTAGAAGAGCAACAAAGAGCAATGATGTCCCAAAAGGCTACCTTGCAGTCTATGTTGGAGATAAAATGAGGCGGTTTTTAATTCCTGTATCATACTTAAACCAACCTTTGTTCCAAGAATTACTAAACCAAGCAGAAGAAGAATTCGGTTATGATCATCCGAATGGCGGTCTCGCAATTCCATGCGGGGAGGATGAGTTCTTATACCTCACTTCCAAGTTGAGTAGGCT 251 0.4223 MAFRIPGIRRATKSNDVPKGYLAVYVGDKMRRFLIPVSYLNQPLFQELLNQAEEEFGYDHPNGGLAIPCGEDEFLYLTSKLSRL 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120878g00008 84 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 81 IPR003676 GO:0009733
Stsc120878g00008 84 Pfam Auxin responsive protein 11 79 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120878g00008 Stsc-Chr120878 45463 45713 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120878g00008 16 77 Calmodulin-binding Proteins AT3G43120 59.677 9.96e-22 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120878g00008 K14488 - gmx:100777479 132.494