Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120878g00005 ATGGGATTCCATTTACCTGCTATTAGAAGGGCATCATCCTCAGTTGCCACAAAACAATTACAAACTTCCAAGTCTATGGAAGTTCCCAAGGGCTATCTCGCGGTCTATGTCGGAGAGAAAACGAAGCGGTTTGTGATTCCTGTATCATACTTGAATCAATCTTTGTTTCAAGAATTACTAAACCAAGCCAAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACAATTCCTTGCAGTGAAGATGCTTTCTTAGACCTCACGCTCATAAGTGAGAAGTCGAAGCTTCGGTGGCTTCCATCGCTGAATTCACTCGGAATCAAAATCGCAGACATGTCTGATCCATACGAGCGTGTGAAAGGTGGAAGATTGGCCTTCAAAGGAGGAACCCTAGCCACTCGCTCCAAAGCCATCGACAAGAAGAAAAAAAAGAAGAACAAGAACAAGAACTCTAACGAACTTGATGAAAACCCTGCCATCGACGAGCAAAAGCAAGAACCTGAGGAGGTTCAGCAACAAGGTGAGGTATCTGCGTCAGGAGAAGCGTACACCATTGACGCCGCCAAGCGAATGAAGTACGAACAGCTCTTTCCCGTTGAAGCCAAGAAATTTGGTTACCAACCCAAAACTGACTTCAAGTCCGTTGAAGATGCCCTCGATGATCGTGTCAAGAAGAAGGCTGATCGTTACTGCAAATGA 702 0.4501 MGFHLPAIRRASSSVATKQLQTSKSMEVPKGYLAVYVGEKTKRFVIPVSYLNQSLFQELLNQAKEEFGYDHPMGGLTIPCSEDAFLDLTLISEKSKLRWLPSLNSLGIKIADMSDPYERVKGGRLAFKGGTLATRSKAIDKKKKKKNKNKNSNELDENPAIDEQKQEPEEVQQQGEVSASGEAYTIDAAKRMKYEQLFPVEAKKFGYQPKTDFKSVEDALDDRVKKKADRYCK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120878g00005 233 Pfam FAM32A 117 176 IPR013865 -
Stsc120878g00005 233 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
Stsc120878g00005 233 Pfam Auxin responsive protein 15 88 IPR003676 GO:0009733
Stsc120878g00005 233 MobiDBLite consensus disorder prediction 137 182 - -
Stsc120878g00005 233 MobiDBLite consensus disorder prediction 149 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120878g00005 Stsc-Chr120878 15955 17864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120878g00005 27 85 Calmodulin-binding Proteins AT3G43120 57.627 2.79e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120878g00005 - - gmx:100500388 160.999