Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120876g00004 ATGATGGACACTCCTTCAGATTACCCTCTCTCACTCCTTCTCCTGCTCCTTTCCCTCCCGCCTCTCTTCGCCTTCTTCCTCCTCCACCGTCGCCGCCACTCCTCCTCCCGCCGCCACCCTCCAGGGCCACCGGGATGGCCAATTTTCGGCAACTTATTCCAGCTCGGAGACATGCCACACCGCACCATCGCCAACCTAAGCCAAACCTACGGCCCCGTCGTGCGCCTCCAGCTGGGCGCCATCAACACCGTCGCCATCCTGGACGCCAAAACCGCCACCGATTTCTTCAAGTCCCACGACCACAACTTCGCCGACAGAACAATCAACCAAACCATGCGAGTCCACAACTACGACAAGTCCTCTCTAGCCCTCGCCCCTTACGGCCCTCACTGGCGCCTCATGCGCCGCCTCCTCACCGTCGACATGCTGGTGGCGAAACGCATCAACGATACCGCCCCAGTACGGCGGAAGTGCGTGAACGACATGGTTTCCTGGGTAGCAAAAGAAGCTGGAAAAGTGAAAGCCGGCGAAGGTGTCCACGTGGCAAGATTCGTGTTCTTGATGTCGTTCAACCTATTCGGGAACCTGCTGCTTTCCCGGGACATGTTCGACCCGGAATCGGAGACGGGTTCGGAGCTGTTTGAGGCGATGATGGGGCTTATGGAGTGGACAGGGCACCCAAACGTGGCGGACGTGTTCCCGTGGCTTGGGTGGGTGGACCCGCAGGGGCTGCAGCGGAGGATGAAGAGGGACATGGGAAAGGCCATTGAGATTGCTTCCAGGTACGTCAAGGAGCGCTTGGAGATTCAGCATGGCGATGATGGCGGTTTTTCTCGTAAGAAGGATTTCTTGGATGTGCTTCTTGATTTTCAGAGCGGTGGCACTGACGACGCACGGAACGTCTCCGATAAGGACCTCAACGTATTTATATTGGAAATTTTCATGGCTGGATCAGAAACTACAAGTAGCACGATAGAATGGGCTCTAACGGAGCTTCTCTGCAACCGGGACTGCCTGACGAAGGTAAAATCAGAGCTCAATAGAGTGGTTGGAACCACAAGAGACTTGGAAGAGACTGACATAGAGAACCTGCCATACCTTCAAGCTGTGGTGAAAGAAACGCTTCGTTTGCACCCTCCCATTCCCTTGCTTGTTCCTCGAAGGGCCATTCAGGACACACACTTCATGGATTACTACATACCAAAAGACACGCAGATCTTCGTGAACGTGTGGGCCATCGGGAGGGACCCACATGCGTGGAAAGACCCTTTGACCTTCAACCCAGACAGGTTTATTTCTTCTGGGAGTGAGTCAAAGCTTGATTACAAAGGTCAACACTATGAGTTCATTCCTTTTGGTGCTGGAAGGAGGATGTGTGCGGGGGTCCCACTGGCCCACAGGGTCCTCAACTTGGTGCTGGGTTCACTGCTACATCGCTTTGATTGGGAGCTTGATAGCCGTGTCACGCCTTCAACCATGGACATGAGGGATAAATTGGGAATTACAATGAGGAAGCTTGAACCCTTGCTTGCGGTGCCGAAATTTGTTCCTCCATCATGA 1560 0.5429 MMDTPSDYPLSLLLLLLSLPPLFAFFLLHRRRHSSSRRHPPGPPGWPIFGNLFQLGDMPHRTIANLSQTYGPVVRLQLGAINTVAILDAKTATDFFKSHDHNFADRTINQTMRVHNYDKSSLALAPYGPHWRLMRRLLTVDMLVAKRINDTAPVRRKCVNDMVSWVAKEAGKVKAGEGVHVARFVFLMSFNLFGNLLLSRDMFDPESETGSELFEAMMGLMEWTGHPNVADVFPWLGWVDPQGLQRRMKRDMGKAIEIASRYVKERLEIQHGDDGGFSRKKDFLDVLLDFQSGGTDDARNVSDKDLNVFILEIFMAGSETTSSTIEWALTELLCNRDCLTKVKSELNRVVGTTRDLEETDIENLPYLQAVVKETLRLHPPIPLLVPRRAIQDTHFMDYYIPKDTQIFVNVWAIGRDPHAWKDPLTFNPDRFISSGSESKLDYKGQHYEFIPFGAGRRMCAGVPLAHRVLNLVLGSLLHRFDWELDSRVTPSTMDMRDKLGITMRKLEPLLAVPKFVPPS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120876g00004 519 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 Pfam Cytochrome P450 40 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 SUPERFAMILY Cytochrome P450 40 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 CDD CYP76-like 67 513 - -
Stsc120876g00004 519 FunFam Cytochrome P450 76C4 31 512 - -
Stsc120876g00004 519 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Stsc120876g00004 519 Gene3D Cytochrome P450 25 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120876g00004 519 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120876g00004 Stsc-Chr120876 24916 28732 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120876g00004 22 513 Cytochrome P450 AT3G52970 44.118 6.22e-144 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120876g00004 K22983 - gmx:100785241 756.903