Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120873g00024 ATGGGGAAGCTGAAAGTGTATGCAGATCGTATGTCCCAGCCTTCTCGTGCAGTCATCATCTTCTGCAGGATTAGCGGAATTGACTTCGAGGAGATTAAGGTAGATATTTCCAAAGGTCAACACCTCTCTCCTGACTTCACAGAAGTAAACCCTCTGCAGAAAGTTCCGGCTATTGTTCATGGAAGCTTGAAACTCTCTGAGAGCCATGCAATCCTAGTATATCTTGCTTCTGCCTTTACTGGAATTGCTGACCACTGGTATCCAACCGAGTTGTCTAGAAGATCCAAAATTAACTCAGTAATGGATTGGCATCACTCTAATTTACGAAATGGAGCAGTGAATTATGCAATAAATACTACACTAGCACCTGCCCTCGGCCGTCAACTGAACCCAAAAGCAGCTTCTGAAGCGGAAAAGGTCTTATTATCTTCTCTGAAAACACTAGAGGATATCTGGCTTGATGGAGATGGAGGCTTTCTGTGTAATGGTATCCAACCATCCTTGGCAGATCTCAGCATGGTTTGTGAACTTATGCAACTTGAGGTTTTGGATGAGAGGGATCGCAATCGTATATTATCTCCTTACAAGAAAGTTCTTCAGTGGATTGAGAATACAAGAACTGCAACAAATCCTCATTTTGAAGAAGTACATAATATCCTTTATAAAGCTAAAAAGAAATTTGAACAGCAGCGTGCAAGGACAGCTGAAACTGGGACTAGTCCTAGCAACAAGACGGGGGGATATTCAAAGATATGA 756 0.422 MGKLKVYADRMSQPSRAVIIFCRISGIDFEEIKVDISKGQHLSPDFTEVNPLQKVPAIVHGSLKLSESHAILVYLASAFTGIADHWYPTELSRRSKINSVMDWHHSNLRNGAVNYAINTTLAPALGRQLNPKAASEAEKVLLSSLKTLEDIWLDGDGGFLCNGIQPSLADLSMVCELMQLEVLDERDRNRILSPYKKVLQWIENTRTATNPHFEEVHNILYKAKKKFEQQRARTAETGTSPSNKTGGYSKI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120873g00024 251 MobiDBLite consensus disorder prediction 233 251 - -
Stsc120873g00024 251 SUPERFAMILY GST C-terminal domain-like 84 217 IPR036282 -
Stsc120873g00024 251 Gene3D - 83 239 - -
Stsc120873g00024 251 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 227 IPR010987 -
Stsc120873g00024 251 MobiDBLite consensus disorder prediction 230 251 - -
Stsc120873g00024 251 SUPERFAMILY Thioredoxin-like 1 81 IPR036249 -
Stsc120873g00024 251 CDD GST_N_Theta 4 79 IPR040075 -
Stsc120873g00024 251 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Stsc120873g00024 251 SFLD Main.4: Theta-like 3 231 - -
Stsc120873g00024 251 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Stsc120873g00024 251 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 3 238 IPR043377 -
Stsc120873g00024 251 SFLD Glutathione Transferase (cytosolic) 3 231 IPR040079 -
Stsc120873g00024 251 Gene3D Glutaredoxin 3 82 - -
Stsc120873g00024 251 FunFam Glutathione S-transferase theta-1 84 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120873g00024 Stsc-Chr120873 121545 123979 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120873g00024 1 251 Glutathione S-transferase Gene Family AT5G41210 62.151 2.33e-115 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120873g00024 K00799 - gmx:100799229 426.787