Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120873g00002 ATGTCTGGATGCAATAAATCTCCAAAAAGTGATAAACATTCGATCAAATATAAGCAGAATCAACATGGGGGAAGTCTTTCTCGTGTGAATCATAAGCCTTCTGTTTCCAATAGTGAGAATAAGCAGTACTACACAAGTTCTGAGCCAAAGCCGAAGCACCCTCAGATACTGAGCACCGCTCAGCTCATCTCTGCAGTGGGACAGATATGGGATTCTGCTAGTCGCCCGCTGTCAGGTTTGCTTCGTGAGAAAAATGCGAGTCGAGATGATAAAGGGTTCCCCATAAAGAATATTCCTGGTGGCATTCATGCGGAAAGGGATGGAGGGGTTTGCAGTTCAACTAACACTAATTACTTTCATGTTAATGTGGGGGCTGCGGCATATGGTTCGCAGATTGTACAGGAAAAATTGGATTTCCCGACAGTAACACAGAAGGCCTTGATTCTTCAATCTGGTAATGGAAGCGAAGAGCGTATTCATTCTTTGTTCCAGAGATTTTTGCAGGCCACTGATAACAGTTTAAATGAATATTGGAAAGAAATAGAACTTGGGAGTGAGAAAATCTCATTTCAATCACGAAATGTTTATTGGCGGATGAGTAGGAATGCACCTGAAGGACTTAAATACCATGTGAAGGCTACAGATCTTGCGAACAAGAAAAATAGTTCTCCAGTGGATGGGGACTGCATTTCAACAGATACAAGCACCTTGGCAGTGGCTAACAAGAGTGATGTTTTCAATCCGGATTTAATTTTAGATGAAGATCTACCATTATCCAGCGATACAACAATGGACACAGAAAATATTAGCACTCTGTGTTCAGATTATTTTCTTCCAGTTTTGCCTGGCACTAATGCTGATGTTGGGGCTTGCCAGATCTCGTCTGCTAGTATCTATACAGATTATCATATTAAATCTTTAGATACCTGTGATAGTGCTTCGATGCACTGCCAGCATAAGATTGACAATAATGAATTGCTGGAAATTCAAGGAAGACATTTTAAGGATATAACTGATGGTGAAGCTAAGGTTCAGAGCTTTGCGGCAACCCCTCAGAAGCCTTGTTATCCTGTTGCTAAGCAAGAGCATGCTTTTTCTGGTGCATTGGCTGGTGTATGTGTTAGCGTTTGTCTACATCCAGTTGACACGATTAAGACGGTTATTCAGTCATGCCGTGAAGAACAGAGGTCCATTGTTAACCTTTGCAAATCGATTGTTTCTGATAGAGGATTGCTCGGTCTATATCGTGGAATTACTACAAACATTGCTTGTTCTGCTCCAACTTCTGCAGTTTATACTTTCACTTATGAATCTGTTAAAGCAGCTTTGCTTCCGTATCTTTCAAAGGAGTATTATTCTTTTGCCCATTGTGTCGGTGGTGCTTCTGCAAGTATTGCCACCTCTTTTATATTCACTCCTAGTGAACGAATTAAGCAGCAGATGCAAGTTGGGTCTCATTATCGCAGCTGTTGGGATGCTTTGGTAGGAATTATCAGAAATGGTGGTTTTCCATCGCTTTATGCAGGTTGGGGAGCTGTACTGTGCCGAAATGTTCCACATTCAATTATCAAGTTTTATACATATGAAAGCTTGAAGAAAGCGATGCCATCGAAGCCATCTAGTATTCAACCTAACACATTTCAGACTTTAGTCTGTGGAGGAATAGCTGGATCCACTGCTGCTTTGTTTACCACTCCTTTTGATGTGATCAAGACAAGATTACAGACACAGTGGACTGCAGCTCCCTGGCTCTATGAATCAATATGA 1767 0.4143 MSGCNKSPKSDKHSIKYKQNQHGGSLSRVNHKPSVSNSENKQYYTSSEPKPKHPQILSTAQLISAVGQIWDSASRPLSGLLREKNASRDDKGFPIKNIPGGIHAERDGGVCSSTNTNYFHVNVGAAAYGSQIVQEKLDFPTVTQKALILQSGNGSEERIHSLFQRFLQATDNSLNEYWKEIELGSEKISFQSRNVYWRMSRNAPEGLKYHVKATDLANKKNSSPVDGDCISTDTSTLAVANKSDVFNPDLILDEDLPLSSDTTMDTENISTLCSDYFLPVLPGTNADVGACQISSASIYTDYHIKSLDTCDSASMHCQHKIDNNELLEIQGRHFKDITDGEAKVQSFAATPQKPCYPVAKQEHAFSGALAGVCVSVCLHPVDTIKTVIQSCREEQRSIVNLCKSIVSDRGLLGLYRGITTNIACSAPTSAVYTFTYESVKAALLPYLSKEYYSFAHCVGGASASIATSFIFTPSERIKQQMQVGSHYRSCWDALVGIIRNGGFPSLYAGWGAVLCRNVPHSIIKFYTYESLKKAMPSKPSSIQPNTFQTLVCGGIAGSTAALFTTPFDVIKTRLQTQWTAAPWLYESI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120873g00002 588 MobiDBLite consensus disorder prediction 19 55 - -
Stsc120873g00002 588 Pfam Mitochondrial carrier protein 452 536 IPR018108 -
Stsc120873g00002 588 Pfam Mitochondrial carrier protein 362 443 IPR018108 -
Stsc120873g00002 588 Pfam Mitochondrial carrier protein 545 578 IPR018108 -
Stsc120873g00002 588 Gene3D Mitochondrial carrier domain 337 450 IPR023395 -
Stsc120873g00002 588 Gene3D Mitochondrial carrier domain 451 588 IPR023395 -
Stsc120873g00002 588 SUPERFAMILY Mitochondrial carrier 362 580 IPR023395 -
Stsc120873g00002 588 ProSiteProfiles Solute carrier (Solcar) repeat profile. 358 442 IPR018108 -
Stsc120873g00002 588 ProSiteProfiles Solute carrier (Solcar) repeat profile. 544 588 IPR018108 -
Stsc120873g00002 588 MobiDBLite consensus disorder prediction 1 55 - -
Stsc120873g00002 588 ProSiteProfiles Solute carrier (Solcar) repeat profile. 451 534 IPR018108 -
Stsc120873g00002 588 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 329 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120873g00002 Stsc-Chr120873 8423 11816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120873g00002 366 577 Chloroplast and Mitochondria Gene Families AT1G07030 34.842 9.04e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120873g00002 - - gmx:100812271 706.442