Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120873g00001 ATGAAGCAAAACAATATTTTGAAGGTTCGTGAGGAGAAGTACCAATCAAGAATAAATGCACTTGAAACTCTTGCAGCTGGGGCGACTGAAGAGAATGAGGTGGTTGCAAGTTGGGTTCAGCAATTGAAGGTTTCTTTGCAACTTGAACAAAGTAAATTTGAGGAGAAGAAGAAACTTGAAGAGCAGGATTTTTCTCGATTAAAGAAAGAAAAAGTTCGTAATGAAATTGAAGTTTCTACACTGAAGAAAGAACTGGAAATGATCAGAAGAACACATGAAGAACATGTTTTGCAGCTAGAATCACAAGCTACTGAATCTAAAGTTGAGTACTTGAAAAGAATATCTGAACTTGAAAGTCTTCTTGCTGATGCAAGGAAGCAAGTGAAGGAATTGGAGACTTATTCAGAATCCAGATCTGTGAATTGGAAGAATAAGGAACGTACTTATCTAAGTTTTGTGGATTGCCAATCTAGAGCTTTTCAGGAATTGAGAGCTGCAATGAAGTCCGTCAAAAATGAAGTGATAAAAACTAAAAGAAGCTACTTAGAGGATTTCAAGTACTTTGGAACAAAGCTCAAAACTCTAGCTGATGCTGCTGAAAACTATCACGTAGTTCTTGCTGAAAATAGAAAATTGTATAATGAAGTTCAAGATTTGAAAGGAAATATTAGGGTATATTGTCGAATTAGACCATTTCTTCCGGGACAAAATCAAAATCATTCAACCATTGAGTTTGCGGGCGAGGATGGAGAACTAATTGTCAATAATCCTATCAAACAAGGAAAAGATAGCCGCAAGCTTTTTAAATTTAACAAGGTTTTTAGTCAAGCTGCAAGTCAAGAAGAAGTTTTTAAGGATACTCAACCGCTAATTCGTTCTGTTCTTGACGGTTACAATGTTTGTATATTTGCATATGGTCAAACTGGTGCTGGAAAAACATATACAATGAGTGGACCATCCTTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTACATGATCTTTTTCATATCTCCCATAGTAGAAGGAGCTCTATCATGTATGAAATTGGTGTTCAAATGGTTGAAATTTATAATGAACAAGTTCGTGATTTACTATCAACAAATGGCCCTCAAAAGAGACTTGGGATTTGGAATACAACCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGCATGCATTCTGTAAATTCAATGACAGATGTGCTTGAGTTGATGAATATTGGGATGACGAATCGGGCTACAAGTGCGACGGCCTTAAACGAAAGGAGTAGTAGATCACATAGTGTTCTCTCCATCCACGTTCGGGGAAATGATTTGAAGACCAACACTCTCTTGCGTGGGTGTCTACACCTAGTAGATCTTGCAGGAAGTGAAAGGGTAGATCGTTCTGAAGCAACAGGAGATAGGCTTAAAGAGGCACAACATATAAACAAATCACTTTCAGCACTTGGCGATGTGATATTTGCTCTAGCACAGAAGAGTTCTCACGTGCCATATAGAAATAGTAAACTGACTCAACTTCTTCAGAGTTCATTAGGTGGTCAAGCAAAAACCCTTATGTTTGTACAACTTAATCCTGATGTTGCTTCATATTCCGAAACTATAAGTACCTTGAAATTTGCTGAGAGGGTTTCTGGTGTGGAGCTAGGCGCTGCTCGTAGCAATAAAGAGGGCAAGGATGTGAGAGAGCTTATGGAACAGGTGGCATCTCTCAAGGATGCAATTGCAAGGAAGGATGAAGAAATTGAGCGGTTGGAGTCGGTCAAGGTTAATCACAATGGTGCAAAGCTTGGTATGATCTCACCAAGGCATTTCCCATCATCTCCAAGAAGACACTCCATGGGGAGTCCTCGACATAGCTTAAAACTCTCAGGAACAAGGAGAATTGGAGCCCGTGACAAAGCAACTCATGATGCTGACAATTGCTCTGAGTATAGTGACAGGCAATCAGAAGCTGGTTCTCCTCGATCAGTGGATGATCTCAGAAGGCACAAGTCCAATTCCCTACAAATGAAATTAGCTAGAGAAGATAATGATCAAAATTTCAATGAGGACATTGACCTCTTAGGATTTGGAGATGCAGATTCAGAGGAGCGATTAAGTGACATATCTGATGGGGAACTTTCAATGGGTACAGAAACTGATTCAATCAGCAGTATTGTTGAGTACACTCTTTTCCCTGAATTCGAGAAGGCAACTGAAATCACACCAGCTAAGAACACAACAGTGGACAACCTTCCACCTCAGAGTGTGGAAAAGCCTATCATGCCATCCAAAATTCCCAAAGCCCCGCAAGTCTCATCAAAACTGCCAACAAGATCTGCTAGGCTATCATTGAACAGAACATCCTCATTGTCAAATTCAAGTGTCAGAAAACAGACAGCTGGTAGCTCTTCTTCGGCGAAGCCCTCCAAAAGATGGCAATAG 2436 0.4007 MKQNNILKVREEKYQSRINALETLAAGATEENEVVASWVQQLKVSLQLEQSKFEEKKKLEEQDFSRLKKEKVRNEIEVSTLKKELEMIRRTHEEHVLQLESQATESKVEYLKRISELESLLADARKQVKELETYSESRSVNWKNKERTYLSFVDCQSRAFQELRAAMKSVKNEVIKTKRSYLEDFKYFGTKLKTLADAAENYHVVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQNQNHSTIEFAGEDGELIVNNPIKQGKDSRKLFKFNKVFSQAASQEEVFKDTQPLIRSVLDGYNVCIFAYGQTGAGKTYTMSGPSLSSKSDWGVNYRALHDLFHISHSRRSSIMYEIGVQMVEIYNEQVRDLLSTNGPQKRLGIWNTTQPNGLAVPDASMHSVNSMTDVLELMNIGMTNRATSATALNERSSRSHSVLSIHVRGNDLKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGKDVRELMEQVASLKDAIARKDEEIERLESVKVNHNGAKLGMISPRHFPSSPRRHSMGSPRHSLKLSGTRRIGARDKATHDADNCSEYSDRQSEAGSPRSVDDLRRHKSNSLQMKLAREDNDQNFNEDIDLLGFGDADSEERLSDISDGELSMGTETDSISSIVEYTLFPEFEKATEITPAKNTTVDNLPPQSVEKPIMPSKIPKAPQVSSKLPTRSARLSLNRTSSLSNSSVRKQTAGSSSSAKPSKRWQ 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120873g00001 811 Coils Coil 564 594 - -
Stsc120873g00001 811 MobiDBLite consensus disorder prediction 768 811 - -
Stsc120873g00001 811 PANTHER KINESIN-LIKE PROTEIN KLP-3 52 775 IPR027640 GO:0003777|GO:0007018
Stsc120873g00001 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 587 IPR027417 -
Stsc120873g00001 811 Pfam Kinesin motor domain 228 548 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc120873g00001 811 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 164 552 - -
Stsc120873g00001 811 Coils Coil 107 134 - -
Stsc120873g00001 811 ProSiteProfiles Kinesin motor domain profile. 222 550 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc120873g00001 811 Coils Coil 11 31 - -
Stsc120873g00001 811 Gene3D Kinesin motor domain 163 552 IPR036961 -
Stsc120873g00001 811 MobiDBLite consensus disorder prediction 598 666 - -
Stsc120873g00001 811 Coils Coil 82 102 - -
Stsc120873g00001 811 PRINTS Kinesin heavy chain signature 297 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc120873g00001 811 PRINTS Kinesin heavy chain signature 451 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc120873g00001 811 PRINTS Kinesin heavy chain signature 500 521 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc120873g00001 811 PRINTS Kinesin heavy chain signature 420 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc120873g00001 811 MobiDBLite consensus disorder prediction 742 811 - -
Stsc120873g00001 811 MobiDBLite consensus disorder prediction 629 648 - -
Stsc120873g00001 811 Coils Coil 50 70 - -
Stsc120873g00001 811 SMART kinesin_4 220 558 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120873g00001 Stsc-Chr120873 588 4978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120873g00001 210 584 Calmodulin-binding Proteins AT5G65930 40.691 1.80e-75 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120873g00001 K10406 - gmx:100777089 1263.44