Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120871g00020 ATGAAGTTTCTTTCACTTCTCAAGAGGAAAAATATTATTAGGTCTTTGCCATCTTGTCACCAACAACCTAGAACCCTTTCTTTCAAAGACATGTTCAAAACTATTAATTCAGCCTTCAACATTATTATTGATGAAGATAATAATAATAATCATAATAATAATGGTCATCATCATCATATTATTGAAGAAGCATTATCCCTTTTCACTGACCAATCTTTTGAGGAGTATGATGATGATGCTACTAGCTTCTCTACATCTTCTGAGGATGATCCAATTGAGATATTGATTCATGAATTGATGATGTGTTCTTCTTTGGATGATGATAACAACAACAAGAAGAAGAACAACAACAATAGGTTTTTCTTTGAGCTTGATGAAACAAGTTCTTCCATTTTTGAAGCATCAAAGAATAAGGGTCCATTATTTCTCAAGGATAGTGTTGTTTTGTCCTTGGATTCCAATGACCCTTTTCTTGATTTCAAGAAATCAATGGAGGAAATGGTTGAGGCTCTTGGTTTGAACAAGGATTGGGAGGGTCTTCAAGATCTCTTGTCTTGGTATTTGAAGGTTAATGCTAAATCCAATCATGGCTACATTGTTGGTGCTTTTGTTGATTTATTGGTAGGTCTTCAACTTCCTAATAATAATAACAATAATAATAATTCATATTTATCTCCTAATATTATTTCTTCTCTTTCTCCTTCTTCTTCTCTTCCTAATGATTTATCTTGTTATAGTACTTTTCAATCTTCTTCTTGTAGCAATAGCACTACACTTTGTGCTTCTAATAATTCATGTTTAGAAGGTGAAGGAGAAGGTCATGATAATCATAATCATAATAGCATTGTTATTAGTCATAGTTCTTCATTGTTGTTAGAGCAAGTTAAAGAAGACATTGTTCTTCATGAAGATATTATTGATGAGGCTTCATCTTCTTCTTCTAGGAATGTCTAA 954 0.3208 MKFLSLLKRKNIIRSLPSCHQQPRTLSFKDMFKTINSAFNIIIDEDNNNNHNNNGHHHHIIEEALSLFTDQSFEEYDDDATSFSTSSEDDPIEILIHELMMCSSLDDDNNNKKKNNNNRFFFELDETSSSIFEASKNKGPLFLKDSVVLSLDSNDPFLDFKKSMEEMVEALGLNKDWEGLQDLLSWYLKVNAKSNHGYIVGAFVDLLVGLQLPNNNNNNNNSYLSPNIISSLSPSSSLPNDLSCYSTFQSSSCSNSTTLCASNNSCLEGEGEGHDNHNHNSIVISHSSSLLLEQVKEDIVLHEDIIDEASSSSSRNV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120871g00020 317 NCBIfam uncharacterized plant-specific domain TIGR01568 148 211 IPR006458 -
Stsc120871g00020 317 ProSiteProfiles OVATE domain profile. 149 209 IPR006458 -
Stsc120871g00020 317 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 72 210 IPR038933 GO:0045892
Stsc120871g00020 317 Pfam Transcriptional repressor, ovate 153 210 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120871g00020 Stsc-Chr120871 130436 131389 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc120871g00020 Ovate 2.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120871g00020 - - adu:110278105 282.337