Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120870g00006 ATGGAATCTGCTCTTATTAGCTCTCTACCATTTTGGTATCTCCTTCTCTTACTCGTTGGATTCATCACACCGTTTCTCAAATTCCTCAAACACCAAATAACTTCAAAATCAAAACAAACTACATTACTCCCTCCGGGACCAAAACCATGGCCTATAATTGGTAACCTACCCGAAATGATAGCAAACAGGCCAACATCTAGATGGATACATAACATCATGAGTGACTTAAACACCGAGATCGCATGTATTCGTCTAGGTAACATTCATGTGATTCCAATCACTAGCCCTGAAATTGCTCGTGAAATATTAATAAAACAAGATTCAATTTTCGCATCAAGACCTTCGAATTGGTCCAGTGAATATGTTTCAAGTGGGTACTTAAGCACAGTATTTGCACCTTATGGAGAACAATGGAAGAACATGAAGAAAGTGATGGCGAATGAATTGGTGTCTCCAAAAAGACTTCAATGGCTACATGACAAGAGGGTGGAGGAGGCCAACAACATTGTTCGCTATGCTTACAACCAATGCAATAAGAATAGTGGTGGTGGCCTTGTGGATGTGAGGTTCGTAGGACGACATTACTCCGGGAACATCATTAGAAGGTTGGTTTTCAATGAAAGACACTTTGGTAAAGGAAGGGAAGATGGAGGGCCTGGATTTGAGGAAGTGGAACATATAGATGCAATTTTCACTGTTTTGAGATACATCTTTGCATTCTCTATCTCTGATTACGTTCCATGCTTGAGAGAGCTTGACTTGGATGGCCATAAGAAGGAGTTGAAGAAGGCCACTAAGTTGATGATGAAGTATCATGATCCCTTAATTGAAGATAGGATTCAGCAATGGAAGATTGGCAAAAGAACACATCAAGAGGACTTGCTTGATGTTCTAATCTCATTGAAAGATGCTAATGATAATCCTCTTTTGACTCTTGATGAAATCAAGTCTCAAATTATGGACATGATGGTCGCAACCGTAGACAATCCATCGAATGTATTCGAATGGGGACTCACCGAGATGCTAAATCAGCCGGAGATACTACGAAAGGCAACGGAGGAAATAGATAGCGTAGTGGGTAAAGAAAGACAAGTTCAAGAATCAGACATTCCAAAACTCAACTACCTAAAAGCATGCGCAAAAGAAGTGTTTCGCCTTCATCCCATTGAAGACATCAACGCCACCCATGTGTCCATGGAGGACACATTTATTGCCAACAACACTTACTTCATTCCTAAAGGTAGCCACGTAGTTCTAAGGCGACAAGGTATTGGACAAAATCCAAGAGTATGGGAAAAACCATTGAAGTTTAAACCCGAACGTCATTTACAAAAGGATAATGACGGGTTTAAGAATCTGAATTTAAATGAGCCGAATTTGAACTTGATCACGTTTAGCACCGGAAGACGTGCATGTCCTGGGATCATGCTTGGGTCTACAATGACAATTATGTTGTTTGCTAGGATGTTGCATGGGTTCAATTGGAGTGTGCCACCAAATGAGACAACCATTGATCTCTCTGAATCCGAGGGAGGTACCATTAAAGGAAAGCCACTGGTGGCACTTGCAACGCCACGGTTACCAGCGGAGGTGTATTGA 1599 0.4134 MESALISSLPFWYLLLLLVGFITPFLKFLKHQITSKSKQTTLLPPGPKPWPIIGNLPEMIANRPTSRWIHNIMSDLNTEIACIRLGNIHVIPITSPEIAREILIKQDSIFASRPSNWSSEYVSSGYLSTVFAPYGEQWKNMKKVMANELVSPKRLQWLHDKRVEEANNIVRYAYNQCNKNSGGGLVDVRFVGRHYSGNIIRRLVFNERHFGKGREDGGPGFEEVEHIDAIFTVLRYIFAFSISDYVPCLRELDLDGHKKELKKATKLMMKYHDPLIEDRIQQWKIGKRTHQEDLLDVLISLKDANDNPLLTLDEIKSQIMDMMVATVDNPSNVFEWGLTEMLNQPEILRKATEEIDSVVGKERQVQESDIPKLNYLKACAKEVFRLHPIEDINATHVSMEDTFIANNTYFIPKGSHVVLRRQGIGQNPRVWEKPLKFKPERHLQKDNDGFKNLNLNEPNLNLITFSTGRRACPGIMLGSTMTIMLFARMLHGFNWSVPPNETTIDLSESEGGTIKGKPLVALATPRLPAEVY 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120870g00006 532 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00006 532 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00006 532 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00006 532 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00006 532 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00006 532 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00006 532 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00006 532 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00006 532 FunFam Cytochrome P450 9 36 530 - -
Stsc120870g00006 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Stsc120870g00006 532 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 31 531 - -
Stsc120870g00006 532 Gene3D Cytochrome P450 36 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00006 532 SUPERFAMILY Cytochrome P450 44 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00006 532 Pfam Cytochrome P450 44 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120870g00006 Stsc-Chr120870 88677 91028 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120870g00006 23 532 Cytochrome P450 AT5G05260 52.174 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120870g00006 - K12153 gmx:100809902 675.241