Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120870g00004 ATGAAGAAAGTGATGGCCAATGAATTGGTGTCTCCAAGAAGACTTCAATGGCTACAAGACAAGAGGGTGGAGGAAGCTGACAACATTGTTCGCTATGTTTACAACCAATGCAATGAGAAAAATGGTGGTGGCCTTGTGGATGTGAGGTTGGTCGCACGACATTACTCAGGGAACATCATTAGAAGGTTGGTTTTCAATGCAAGGCACTTTGGTAAAGGAAGAGAAGATGGAGGACCTGGATTTGAGGAGGTGGAACATATAGATGCTATTTTCACTGTTTTGAGATACCTCTTTGCATTCTCCATCTCTGATTTCGTTCCATGCTTAAGAGGGCTTGACTTGGATGGTCATAAGAAGGAGTTGAAGAAGGCTACTAAGTTGATAACAAAGTATCATGACCCCTTAATCGAAGATAGGATTCAGCAATGGAAGATTGGCAAAAGAACACATCAAGAGGACTTGCTTGACGTTCTAATCTCATTGAAAGATGCTAATGATAATTCGCTTTTGACTCTTGATGAAATTAAGTCTCAAATTATGGATATGATGATTGCAACGGTGGACAATCCATCAAATGCATTTGAATGGGGACTTGCCGAGATGCTAAATCAGCCGGAAATACTTCGAAAGGCGACGGAGGAAATAGATAATGTAGTGGGTAAAAAAAGACAAGTACAAGAATCAGACATTCCAAAACTCAACTATGTAAAAGCATGCATAAGAGAAGTGTTTCGCCTCCACCCTATTGATGATATCAACGCCACCCATGTTTCCATGGAGGACACATTTGTTGCCAACAATACCTACTTCATTCCAAAAGGCAGTCACATGATTCTAAGGCGACAAGGAATCGGACAAAATCCAAGAATATGGGAAAAACCATTAAAATTTAAACCCGAACGCCATTTACAACAAAATAATGATGGATTTAAGAACTTGAATTTAAATGAGCCGAGTTTAAATTTGATTACGTTCAGTACGGGAAGACGAGCATGTCCTGGGATCATGCTTGGGTCTAATATGACAGTTATGTTGTTTGCTAGGATGTTGCATGGGTTTAACTGGAGTGTGCCACCAAATGAGACAGCCATTGATCTCTCCGAAACAGAAGGAGGTACCATAAAAGGAAAGCCACTGGTGGCACTTGCAACGCCACGGCTACCAACGGAGGTGTATTATTGA 1182 0.4103 MKKVMANELVSPRRLQWLQDKRVEEADNIVRYVYNQCNEKNGGGLVDVRLVARHYSGNIIRRLVFNARHFGKGREDGGPGFEEVEHIDAIFTVLRYLFAFSISDFVPCLRGLDLDGHKKELKKATKLITKYHDPLIEDRIQQWKIGKRTHQEDLLDVLISLKDANDNSLLTLDEIKSQIMDMMIATVDNPSNAFEWGLAEMLNQPEILRKATEEIDNVVGKKRQVQESDIPKLNYVKACIREVFRLHPIDDINATHVSMEDTFVANNTYFIPKGSHMILRRQGIGQNPRIWEKPLKFKPERHLQQNNDGFKNLNLNEPSLNLITFSTGRRACPGIMLGSNMTVMLFARMLHGFNWSVPPNETAIDLSETEGGTIKGKPLVALATPRLPTEVYY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120870g00004 393 Pfam Cytochrome P450 3 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 325 334 IPR017972 GO:0005506|GO:0016705
Stsc120870g00004 393 Gene3D Cytochrome P450 1 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 Coils Coil 208 228 - -
Stsc120870g00004 393 SUPERFAMILY Cytochrome P450 3 386 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PRINTS P450 superfamily signature 185 202 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PRINTS P450 superfamily signature 323 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PRINTS P450 superfamily signature 238 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PRINTS E-class P450 group I signature 174 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PRINTS E-class P450 group I signature 322 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PRINTS E-class P450 group I signature 280 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PRINTS E-class P450 group I signature 332 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PRINTS E-class P450 group I signature 55 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PRINTS E-class P450 group I signature 194 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PRINTS E-class P450 group I signature 237 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120870g00004 393 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 1 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120870g00004 Stsc-Chr120870 10550 12830 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120870g00004 1 392 Cytochrome P450 AT5G05260 51.392 1.91e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120870g00004 - K12153 adu:107486438 632.484