Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120868g00026 ATGGCGGGGAAGGGGAAAGACAAAGAGAAAGAGTCAATCGGCGGTGAGGGTAACATGACGGGGGTTCTCACTCACGGAGGTCGTTACGTCAACTATAATCTCTACGGAAACCTCTTCCAACTCCCTTCCAACTATGTCCCTCCTATTCGCCCTATTGGTCGAGGCGCTTATGGCTTCGTCTGCGCTGCTGTTAATTCAGATACTCGGGAAGAAGTTGCTATCAAGAAGATTGCTGACGCCTTTGACAGTCTTACTAATGCCAAGAGGACTTTGAGGGAGATTCTCCTTCTTCGCCACATGGACCATGAAAATATCATCGCCATTAAGGATATCATTCGACCTCCTGAGAAGGACACCTTCAACCATGTCTACATTGTCTATGAATTGATGGACACTGATCTCAACCACGTTATTCGTTCTGACCAACCTCTTAACCATGACCACTCTCAGTACTTTTTATACCAGCTGTTAAGGGGACTGAAATATGTGCATTCTGCTAATGTCTTACATCGTGATCTTAAGCCTAGCAATATACTTCTCAATGCAAATTGTGACCTTAAAATTGGGGACTTTGGCTTGGCAAGGACAACATCCGAAACCGATTTCATGACGGAATATGTGGTCACCCGATGGTACCGTGCCCCTGAATTACTCCTTAATTGTTCTGATTACACCGCCGCCATTGATATCTGGTCTGTTGGTTGCATATTTGGTGAAATCATGACTAGAGAACCTTTGTTCCCTGGGAAAGATTATGTTCATCAATTAAGGCTTATAACAGAGTTAATAGGTTCACCTGATGAATCCAGCCTTGGATTTCTCCGAAGTGAAAATGCCAGAAAGTATGTTAGACAGCTTCCGCAATGTAGGAAGCAAAAATTCTCGGCCAGATTCCCTATTATGTCTGCGGAAGCATTGGACTTGCTAGAAAAGATGCTTATATTTGATCCCAACAAACGCATCACAGTTGATGAGGCACTTAGTCACCCGTATCTTTCATCACTTCATGACATAAATGATGAGCCAGTTGGTCCTAGGCCATTCAGCTTTGATTTTGAGCACCCATCATACACAACAGAGCACATCAAAGAGCTCATATGGAGGGAAGCAGTGAAGTACAATCCAGATCCTCCATGTCCTTAG 1143 0.4409 MAGKGKDKEKESIGGEGNMTGVLTHGGRYVNYNLYGNLFQLPSNYVPPIRPIGRGAYGFVCAAVNSDTREEVAIKKIADAFDSLTNAKRTLREILLLRHMDHENIIAIKDIIRPPEKDTFNHVYIVYELMDTDLNHVIRSDQPLNHDHSQYFLYQLLRGLKYVHSANVLHRDLKPSNILLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSDYTAAIDIWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDESSLGFLRSENARKYVRQLPQCRKQKFSARFPIMSAEALDLLEKMLIFDPNKRITVDEALSHPYLSSLHDINDEPVGPRPFSFDFEHPSYTTEHIKELIWREAVKYNPDPPCP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120868g00026 380 ProSitePatterns Protein kinases ATP-binding region signature. 52 76 IPR017441 GO:0005524
Stsc120868g00026 380 SUPERFAMILY Protein kinase-like (PK-like) 49 340 IPR011009 -
Stsc120868g00026 380 FunFam Mitogen-activated protein kinase 31 139 - -
Stsc120868g00026 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Stsc120868g00026 380 ProSiteProfiles Protein kinase domain profile. 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120868g00026 380 FunFam Mitogen-activated protein kinase 130 358 - -
Stsc120868g00026 380 Gene3D Phosphorylase Kinase; domain 1 29 369 - -
Stsc120868g00026 380 ProSitePatterns MAP kinase signature. 81 184 IPR003527 GO:0004707|GO:0005524|GO:0006468
Stsc120868g00026 380 Pfam Protein kinase domain 50 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120868g00026 380 Gene3D Transferase(Phosphotransferase) domain 1 130 359 - -
Stsc120868g00026 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 46 333 - -
Stsc120868g00026 380 SMART serkin_6 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120868g00026 Stsc-Chr120868 150987 153637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120868g00026 12 375 MAP Kinase Gene Family AT4G01370 77.747 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc120868g00026 Pkinase 1.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120868g00026 - - gmx:100803024 648.662