Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120868g00023 ATGATCATTCCCGAGAAGAACCGCAAGGAGATCTGCAAGTACCTATTCCAAGAGGGAGTATGCTACGCTAAGAAGGACTACAATCTGGCGAAGCACCCTGAGATCGAGGTGCCGAATCTGCAGGTGATTAAGCTTATGCAGAGCTTCAAGTCGAAGGAGTACGTTAGGGAGACCTTCGCCTGGATGCACTATTACTGGTTCCTCACCAACGACGGCATTGAGCATCTCAGGACTTACCTCAACCTTCCTTCTGAGATCGTCCCCGCCACTCTCAAGAAACAGACCAAGGCATCTGGAAGGCCTTTTGGTGGCCCACCTGGTGACCGCCCCAGGGGCCCACCTCGCTTTGAGGGTGAGCGCAGATTTGGTGACCGTGATGGATACCGTGGAGGTCCCCGTGGACCTGGCGGTGACTTTGGAGGAGACAAGGGTGGTGCTCCTGCTGACTACAGGCCTTCTTTTGGGGGTTCTGGTGGAAGGCCTGGCTTTGGTCGGGGTGCTGGTGGTTTTGGAGGTGGTGCTCCAACAAGCTCAAACGCTCCTTAA 546 0.5513 MIIPEKNRKEICKYLFQEGVCYAKKDYNLAKHPEIEVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQTKASGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGSGGRPGFGRGAGGFGGGAPTSSNAP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120868g00023 181 MobiDBLite consensus disorder prediction 112 128 - -
Stsc120868g00023 181 MobiDBLite consensus disorder prediction 91 181 - -
Stsc120868g00023 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Stsc120868g00023 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 175 IPR037447 -
Stsc120868g00023 181 Gene3D - 1 104 IPR036388 -
Stsc120868g00023 181 FunFam 40S ribosomal protein S10 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120868g00023 Stsc-Chr120868 122756 124330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120868g00023 1 154 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 80.645 2.76e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120868g00023 K02947 - bvg:104888371 224.557