Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120868g00020 ATGAATAATGAGCTTGCACACGCTCTCATGGACTGGGATTTGCAGGCTATTGTGAGAGGATGCAGCGCTACTCATCATCAAACCGACAACATCCTAAGCCTTAATTATTTTCATTTGTGTCCTCATCGACAAGAAGATGACCCTCTCTTCAAGTCTCATCAGAAACAGAAACCACCACTCTCATCCTTGATGATGAATTGGAAGAGCTTTACAAACCTTTCTACCCTAGTGCCGAAACTACAAGTAGATCCCACCACCTTAGCCCCGCTCATGAAGTCAACAAAGTACTCCATCTCAAACCTTCAGATCATCACCCAAAAGATCTCAACAATCCAACTGCATCTAAATGTAAAAGAAGGTACGAAGAAGAATGAAGAGAAGAATAAGAGGGTGGTGAAGCGGGTTCGAGAAGAAGAAGGGTACAATGATGGATGGGCATGGCGTAAATACGGGCAGAAACCAATAAAAGGATCAGAGTATCCGCGGAGCTATTATAGGTGCAGCAGCTGCAAAGGATGCTTGGCTAGGAAACGCGTTCAACGCAGCCATTCCGATCCACAAGTTTTCATAGTTACCTACACAGCTCAACACACCCATCCTCCTCGATCATTCCATCACACTCCAACAAAGGAACAGGGTGGAGTCTCAGCTTAA 654 0.4495 MNNELAHALMDWDLQAIVRGCSATHHQTDNILSLNYFHLCPHRQEDDPLFKSHQKQKPPLSSLMMNWKSFTNLSTLVPKLQVDPTTLAPLMKSTKYSISNLQIITQKISTIQLHLNVKEGTKKNEEKNKRVVKRVREEEGYNDGWAWRKYGQKPIKGSEYPRSYYRCSSCKGCLARKRVQRSHSDPQVFIVTYTAQHTHPPRSFHHTPTKEQGGVSA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120868g00020 217 Gene3D WRKY domain 126 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc120868g00020 217 SMART WRKY_cls 141 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc120868g00020 217 ProSiteProfiles WRKY domain profile. 136 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc120868g00020 217 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 203 IPR044810 GO:0003700
Stsc120868g00020 217 MobiDBLite consensus disorder prediction 197 217 - -
Stsc120868g00020 217 Pfam WRKY DNA -binding domain 142 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc120868g00020 217 SUPERFAMILY WRKY DNA-binding domain 137 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120868g00020 Stsc-Chr120868 109281 110021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120868g00020 11 200 WRKY Transcription Factor Family AT4G01250 36.842 6.28e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc120868g00020 WRKY 4.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120868g00020 - - gmx:102667104 131.339