Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120867g00019 ATGATGACAATAGAGGCAACCATGGATAAAGCCGTTCTCGATGACGTCATTAGGAGGTTGCTCGACGGCAAGGGTGGCAAGCAAGTCCAGCTCTCCGAATCCGAGATCCGTCAGCTCTGCGTCAACGCCAGACAAATCTTCCTCTCCAACCCCATCCTCCTTGATCTCCAGGCTCCCATCCGCATCGGCGGTGACATACATGGCCAGTACCAAGACTTGTTGAGGCTTTTCGAATACGGCGGGTATCCTCCAACCGCGAATTACTTGTTCTTGGGGGATTACGTAGACAGAGGGAAGCAGAGTCTGGAGACCATATGCTTGCTTTTGGCCTACAAGATTAGATATCCTGACAGGGTTCACCTCCTCAGAGGAAACCACGAAGACGCCAAAATTAACCGGATATACGGTTTCTACGATGAGTGTAAAAGGAGATTCAATGTTAGGCTATGGAAGATATTTACAGATTGCTTTAACTGTTTGCCGGTAGCCGCACTCATTGATGGCAAAATACTCTGTATGCATGGCGGACTCTCTCCTGAGTTGCAGACTTTGGATCAGATAAGGGAGATTACGAGGCCTACTGAAATACCAGATAGCGGTCTACTTTGCGATCTCCTATGGGCCGATCCCGATCCTAGCCTCGACGGTTGGGCAGATAGCGACAGAGGCATTTCCTGCACTTTTGGTCCTAATGCTGTCACCGAGTTTTTGGATAAAAATGACCTTGATCTCGTTTGCAGAGGTCATCAGGTTGTGGAGGATGGATATGAATTCTTCGCTAAACGAAGATTAGTCACCATATTCTCTGCTCCAAATTATGGTGGCGAGTTTGACAATGCCGGTGCATTGTTGAGTGTTGATGAATCTCTAGTTTGTTCCTTTGAGATATTGAAACCGGTGGATAAAGGATCCTCATCAAAGGTTGCTCTTAAAAAGCCACCTAAAATTGGTAAGGTATAG 960 0.4708 MMTIEATMDKAVLDDVIRRLLDGKGGKQVQLSESEIRQLCVNARQIFLSNPILLDLQAPIRIGGDIHGQYQDLLRLFEYGGYPPTANYLFLGDYVDRGKQSLETICLLLAYKIRYPDRVHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDGKILCMHGGLSPELQTLDQIREITRPTEIPDSGLLCDLLWADPDPSLDGWADSDRGISCTFGPNAVTEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPVDKGSSSKVALKKPPKIGKV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120867g00019 319 Gene3D - 5 309 IPR029052 -
Stsc120867g00019 319 SUPERFAMILY Metallo-dependent phosphatases 11 302 IPR029052 -
Stsc120867g00019 319 ProSitePatterns Serine/threonine specific protein phosphatases signature. 122 127 IPR006186 GO:0016787
Stsc120867g00019 319 Pfam Calcineurin-like phosphoesterase 64 251 IPR004843 GO:0016787
Stsc120867g00019 319 FunFam Serine/threonine-protein phosphatase 5 309 - -
Stsc120867g00019 319 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 309 - -
Stsc120867g00019 319 Pfam Serine-threonine protein phosphatase N-terminal domain 13 57 IPR031675 -
Stsc120867g00019 319 PRINTS Serine/threonine phosphatase family signature 121 145 IPR006186 GO:0016787
Stsc120867g00019 319 PRINTS Serine/threonine phosphatase family signature 184 211 IPR006186 GO:0016787
Stsc120867g00019 319 PRINTS Serine/threonine phosphatase family signature 59 86 IPR006186 GO:0016787
Stsc120867g00019 319 PRINTS Serine/threonine phosphatase family signature 241 261 IPR006186 GO:0016787
Stsc120867g00019 319 PRINTS Serine/threonine phosphatase family signature 263 279 IPR006186 GO:0016787
Stsc120867g00019 319 PRINTS Serine/threonine phosphatase family signature 155 181 IPR006186 GO:0016787
Stsc120867g00019 319 PRINTS Serine/threonine phosphatase family signature 88 115 IPR006186 GO:0016787
Stsc120867g00019 319 SMART pp2a_7 31 301 IPR006186 GO:0016787
Stsc120867g00019 319 CDD MPP_PP1_PPKL 12 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120867g00019 Stsc-Chr120867 80510 82599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120867g00019 54 245 Calmodulin-binding Proteins AT5G63870 34.361 4.17e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120867g00019 K06269 - gmx:100805030 588.571