Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120867g00002 ATGGGGCATTTATCTTCTATGTTAAATGGTTTGACAAGGTGGAAGAAGGGAAGAAGTTCTGGCAGATGTGTTGGTAGAGATGCTGCTAAAGCTATGGCAAAAGAAGCCAAGAAAAATGACTTGATTCTGTGCAGCTCCGGCACTGTCAATGTTGATGGTTCAAAGAACTATGCATCGATCTTTTCCAAGAAAGGCCAGAAAGGTGTGAACCAAGATTGCTGTGTAGTCTGGGAGGAATATGGATGCCAAGAAGATATGATATTCTGTGGGATATTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCAAAGAGAGTGAGAGAATCAATGCCATCATCTTTGCTATGCAACTGGCAAGAAGCACTTGCACAATCTCCCCTTGATGTTGAGAAAGAGAAGAAGGAGCACAGATTCAACATATGGAAGCACTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTCTTTCAGTACCGCAAGATCGACTCCTTTTACAGCGGAACCACTGCCCTCTCCATTGTTAGACAGGGTGAACTCATCATCATAGCAAATGTAGGTGATTCCCGTGCTGTGTTAGCTACATCATCAGATGATGGAAGTTTGGTTCCAGTTCAATTAACAGTTGATTTCAAGCCTAATTTACCCCAGGAGGCAGAGAGAATAATGCGGTGCCAGGGGAGGGTGTTCTGCTTACATGATGAGCCAGGGGTGCATAGGGTGTGGCTGCCGGACGAGGACTCGCCGGGGCTCGCCATGTCTAGGGCTTTTGGTGATTACTGCATCAAAGACTATGGTCTTATATCAGTGCCTGAGGTCACACACAGACATATAAGCACCAAAGATCAGTTTGTTGTTCTAGCCACTGATGGGGTTTGGGATGTGATCTCCAATGAAGAAGCAGTGGACATTGTATCATCAACACCGGACAAAGCAAAGTCGGCGAAGCGCTTGGTGGAGTGCGCGGCGCACGCATGGAAGCGCAAGCGGCGGGGGATAGCCATGGATGACATTTCAGCTATTTGTCTCTTCTTCCATTCTTCTTCATCTTCACCTCAGCAAGTTACCTCAGTTGCCACCCTAAAATAA 1089 0.4665 MGHLSSMLNGLTRWKKGRSSGRCVGRDAAKAMAKEAKKNDLILCSSGTVNVDGSKNYASIFSKKGQKGVNQDCCVVWEEYGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPSSLLCNWQEALAQSPLDVEKEKKEHRFNIWKHSYLKTCAAIDQELFQYRKIDSFYSGTTALSIVRQGELIIIANVGDSRAVLATSSDDGSLVPVQLTVDFKPNLPQEAERIMRCQGRVFCLHDEPGVHRVWLPDEDSPGLAMSRAFGDYCIKDYGLISVPEVTHRHISTKDQFVVLATDGVWDVISNEEAVDIVSSTPDKAKSAKRLVECAAHAWKRKRRGIAMDDISAICLFFHSSSSSPQQVTSVATLK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120867g00002 362 FunFam Probable protein phosphatase 2C 34 48 347 - -
Stsc120867g00002 362 SUPERFAMILY PP2C-like 53 346 IPR036457 -
Stsc120867g00002 362 CDD PP2Cc 56 345 IPR001932 -
Stsc120867g00002 362 SMART PP2C_4 49 343 IPR001932 -
Stsc120867g00002 362 PANTHER PROTEIN PHOSPHATASE 45 343 IPR015655 GO:0004722|GO:0006470
Stsc120867g00002 362 Pfam Protein phosphatase 2C 81 318 IPR001932 -
Stsc120867g00002 362 Gene3D - 43 348 IPR036457 -
Stsc120867g00002 362 ProSiteProfiles PPM-type phosphatase domain profile. 57 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120867g00002 Stsc-Chr120867 9442 11930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120867g00002 1 346 PP2C-type Phosphatase Gene Family AT3G05640 71.510 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120867g00002 - - gmx:100801309 625.165