Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120866g00010 ATGAATCTTCCTCCAGGGTTTTGCTTCTCTCCAACAGATGAAGAACTCATCCTTCACTTTCTCTATAACAAAATTTCTCTACCGTTCCATCCCAACATCATACCGGAACTTGATCCCTCTCATCTTCATCCATGGCAATTAAATGGGAAGGCGTTTTCAAGTGGGAATCAATACTATTTCTTCAGCAACAATAAAGTGAAGCAAAACAGAAGCACAGGAAATGGGTATTGGAAGGAAATAGGTTTGAGCGAACCTATAATCTCATCAGCTGATGCAAACAAGAAATTGGGAATCAAGAAGTATTTTGTCTTCTATCTTAGTGAAGGCACTGAAACCAATTGGATCATGCAAGAATACCATATTTCCTCATCTATGCTTCACAACAATAGCCCTAATGGAACTACTGCTCATCGAAGATTAAAGCCGGATCAAAATAGGAGCAACAATAAATGGGTTGTGTGCAGAGTGTATGAGAAGAACAAGAAGTCACAATCTGAAGAAGGTGGGGATGAGGATGATTGTGGATCAGAACTTTCATACCTAGATGAGGTTTATCTGTCACTTGATGATGATCTTGAAGTCATAAGCCCCCCTAATTAA 600 0.3933 MNLPPGFCFSPTDEELILHFLYNKISLPFHPNIIPELDPSHLHPWQLNGKAFSSGNQYYFFSNNKVKQNRSTGNGYWKEIGLSEPIISSADANKKLGIKKYFVFYLSEGTETNWIMQEYHISSSMLHNNSPNGTTAHRRLKPDQNRSNNKWVVCRVYEKNKKSQSEEGGDEDDCGSELSYLDEVYLSLDDDLEVISPPN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120866g00010 199 SUPERFAMILY NAC domain 1 159 IPR036093 GO:0003677|GO:0006355
Stsc120866g00010 199 ProSiteProfiles NAC domain profile. 3 159 IPR003441 GO:0003677|GO:0006355
Stsc120866g00010 199 Gene3D NAC domain 12 164 IPR036093 GO:0003677|GO:0006355
Stsc120866g00010 199 Pfam No apical meristem (NAM) protein 4 121 IPR003441 GO:0003677|GO:0006355
Stsc120866g00010 199 PANTHER NAC TRANSCRIPTION FACTOR 56 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120866g00010 Stsc-Chr120866 54156 55211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120866g00010 2 164 NAC Transcription Factor Family AT1G61110 38.636 5.04e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc120866g00010 NAM 1.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120866g00010 - - aip:107634622 323.939