Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120865g00021 ATGGGGTTATTTTTGTCAACTTTTTCAAAAATTAGTTTATACAAGATAATCAGGTTGGCAACTCTAATCGATCTGATTGGATCAAATTGGGTATCCGCAATTAGGGTAGCTATTGCTACCCCTAAATTTTATTGTGAGAAAGAAGGAGCATTATTGTTACCAGAAGTTGCTTTTGAGAAAGTGTTCAACAAAATAGAGGATGCAATATTCTACAGACACATTGTTCCAAGATGGTTGTGGAAGCTTCAGAAATGGCTCCAAATTGGACCAGAGAAGAGCCACAGTGAATCCCAACAAATTATTGATAAATTCTTGCATGAATGTATATCATCAAGACTACTTGATGAAGAAAAGGAGAAAAGCATGTTCAACAATAACAAAAATGATGAATCAAACTTTGACATGTTCAAAGCTCTTGTCAAGGAAAATGGAGAAATGAAACAAATTGATTATAAGTTTCTAAGAGACACTGCTATTAATCTGGTAGTAGCAGGAAGAGATGCAATTAGTGCAACTCTTAGTTGGTTTTTTTGGCTTATTTCAACTCACCCTCTTGTTGAAGCAAAGATCCTTGAAGAAATCCAACAAAACTTTACAACCAAACAAGAAAATTGGGCCACTTTAGGAATCAAGGATAATCTTAGCAAACTAGTGTATCTTCATGGAGCAATATGTGAAGCATTGAGACTTTTTCCTCCGGTGCCGTTTGAGCACAAATGCGCCGTCGAATCCGATATACTTCCGAGCGGCGTTTGTGTTAGTCCAAACACCATGGTCTATTTCTCTCTATACTCAATGGGAAGGATGGAACAAATTTGGGGAAAAGATTGCTTGGAATTCAAGCCAGAAAGGTGGATTTCGGAGAACGGGAGTAACATTTACGTACCATCTTACAAGTTCATAGCTTTCAATGCTGGTCCTAGAAGTTGTTTAAGGAGAAATATAAGCTTTATTCAAATGAAGATCGTTACCGTTGCTCTGCTTTCGAAATTTCAAATGAACTTGGTGGAAGGCCATCGTGTGTGTCCAAGTGTTTCTATTATTCTTCACATGAAACATGGCTTGAAGGTCAACGTTACTAAAAGAGTAAATTGA 1095 0.3708 MGLFLSTFSKISLYKIIRLATLIDLIGSNWVSAIRVAIATPKFYCEKEGALLLPEVAFEKVFNKIEDAIFYRHIVPRWLWKLQKWLQIGPEKSHSESQQIIDKFLHECISSRLLDEEKEKSMFNNNKNDESNFDMFKALVKENGEMKQIDYKFLRDTAINLVVAGRDAISATLSWFFWLISTHPLVEAKILEEIQQNFTTKQENWATLGIKDNLSKLVYLHGAICEALRLFPPVPFEHKCAVESDILPSGVCVSPNTMVYFSLYSMGRMEQIWGKDCLEFKPERWISENGSNIYVPSYKFIAFNAGPRSCLRRNISFIQMKIVTVALLSKFQMNLVEGHRVCPSVSIILHMKHGLKVNVTKRVN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120865g00021 364 PRINTS P450 superfamily signature 301 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120865g00021 364 PRINTS P450 superfamily signature 222 233 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120865g00021 364 PRINTS P450 superfamily signature 164 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120865g00021 364 PRINTS E-class P450 group I signature 173 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120865g00021 364 PRINTS E-class P450 group I signature 300 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120865g00021 364 PRINTS E-class P450 group I signature 153 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120865g00021 364 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120865g00021 364 PRINTS E-class P450 group I signature 310 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120865g00021 364 Gene3D Cytochrome P450 37 364 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120865g00021 364 PANTHER CYTOCHROME P450 51 357 - -
Stsc120865g00021 364 Pfam Cytochrome P450 80 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120865g00021 364 SUPERFAMILY Cytochrome P450 57 362 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120865g00021 Stsc-Chr120865 167395 168825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120865g00021 53 364 Cytochrome P450 AT2G23180 42.767 8.09e-95 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120865g00021 - - ahf:112735737 468.003