Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc120865g00009 | ATGGAGTTCGGAGAAGGAGAGTTCAGTGTGGAAGAACAAGTGATGGTGAAACATTCTGAGATCATAAAGAACATGATCGAAGATGGGTCATGCAATGATGAAGAGAGCAAGATTCCATTAGATTCCGTTGACTCAAAGACCCTCAAGAAGGTGATCGAATACTGTAAGCACCACACTCACCATGAAAAGGACAAAGAAGAAGATATCAATGCTTGGAATGCTGAATTTCTCAAAGTTGATCCTAACACCCTTTATGATTTGTTGATGGCAGCAAATTATCTTAAAATTAGGAGTCTGTTGGATCTGATTTACGGAACTATAAAAAACATGATAAAGGGAAAGAAAATAGATGAGATACGCGCAGTCTTCAACATCAAAGATCATGGCTTCACTCCTCAAGAGGAAGAACAGAATCGCAAGGACTACCCACATTTTTATTAG | 441 | 0.3878 | MEFGEGEFSVEEQVMVKHSEIIKNMIEDGSCNDEESKIPLDSVDSKTLKKVIEYCKHHTHHEKDKEEDINAWNAEFLKVDPNTLYDLLMAANYLKIRSLLDLIYGTIKNMIKGKKIDEIRAVFNIKDHGFTPQEEEQNRKDYPHFY | 146 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc120865g00009 | 146 | PIRSF | SCF_Skp | 2 | 144 | IPR016897 | GO:0006511 | |
Stsc120865g00009 | 146 | Pfam | Skp1 family, dimerisation domain | 98 | 142 | IPR016072 | GO:0006511 | |
Stsc120865g00009 | 146 | Pfam | Skp1 family, tetramerisation domain | 7 | 59 | IPR016073 | GO:0006511 | |
Stsc120865g00009 | 146 | SUPERFAMILY | Skp1 dimerisation domain-like | 69 | 143 | IPR036296 | GO:0006511 | |
Stsc120865g00009 | 146 | PANTHER | SKP1 | 7 | 140 | IPR016897 | GO:0006511 | |
Stsc120865g00009 | 146 | SMART | skp1_3 | 7 | 96 | IPR001232 | GO:0006511 | |
Stsc120865g00009 | 146 | SUPERFAMILY | POZ domain | 12 | 62 | IPR011333 | - | |
Stsc120865g00009 | 146 | CDD | BTB_POZ_SKP1 | 7 | 111 | - | - | |
Stsc120865g00009 | 146 | Gene3D | Potassium Channel Kv1.1; Chain A | 4 | 146 | IPR011333 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc120865g00009 | Stsc-Chr120865 | 59316 | 60299 | Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Stsc120865g00009 | Skp1_POZ | 6.3e-16 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc120865g00009 | K03094 | - | ncol:116247723 | 132.88 |