Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120864g00017 ATGATCTTTGCATCATGCTTAATCATGGCAGTTTCAGGTGCAACATACATGTTTGGTCTATACTCCAATGAAGTCAAATCATCATTGGGATATGACCAATCTACCCTCAACTTGATAAGCTTCTTCAAGGACCTTGGTGCAAATCTTGGCATATTCTCAGGGCTTATCAATGAACTCACACCTCCATGGGTGATTCTCTCCATTGGTGCAGCCATGAACTTCTTTGGTTACTTCATGGTTTGGCTCTCTGTCTCTGGCCACATTGCAGTTCCCCACGTTTGGCAAATGTGCCTATACTTCTACATTGGTGCTAATTCACAATCATTTGCAAACACTGGTGCATTGGTAACGTGTGTGAAAAGCTTCCCAAGAAGCCGTGGAAGTGTTATTGGGCTTCTAAAAGGCTATGTTGGATTAAGTGGTGCAATCTTCACTCAACTCTACCATGCTTTCTATGGTGATGATTCTAAGGCTCTAATCTTGCTCATTGGTTATCTCCNNNNNNNNNNTCTGCCAACTGTTCGGATCATGGACATCGTTCCACAACCAAAGGAGCTCAGAGTTTTCTACAAGCTTCTGTATATATCACTTGCTGTTGCTGGTTTTCTCATGGTGCTGATTGTGTTACAGAACAGGTTGAGTTTCAGCAGGGTTGAGTACATTGTTGATGGTGTCTTTGTTCTGTTTCTTCTCCTTCTTCCACTTGTTGTTGTCTTTAGAGAGGAACTTAAGCTCTTGAAGAATCATCACAACATCAATGATGCTTCCTCTTCTTCTTATTCTTCTTCTGGATTCAAAGTTGTTACACAGGTTCCATCTCCATCAGCTAATGAATTGCCCCAACTAGAATCTCAGGTAGCACCAAATTCGAGTAGAACTTCATGTCTAAGCAACATATTCAAACCCCCAAGCAGGGGAGAGGACTACACAATCTTGCAAGCACTTTTCAGCATTGACATGTTAATCCTCTTCATAGCAACAACATTTGGTGTTGGTGGAACATTAACAGCACTAGACAACTTGGGACAAATTGGTAACTCCTTGGGTTACCCCAAGAAAAGCCTCACAACATTTGTATCCCTAGTAAGCATATGGAACTACCTCGGACGCGCCATGTCAGGCTTCGCGTCCGAGATATTCCTGAAGAAATACAAGTTCCCTCGGCCGTTGATGCTCTCGCTTGTCATGCTCCTATCTTGTGTAGGCCACATTCTAATCGCGCTCGGAATCCCAAACTCGCTCTACTTCGCATCCGTGATCATCGGATTCTGCTTCGGTGCCATGTGGCCATTAATGTTCGCAATCATATCCGAAATTTTCGGACTCAAGTACTACTCAACACTATACAATTTTGGAGCTGTGGCTAGCCCTGTTGGATCTTACATACTAAATGTGAAAGTAACAGGATATTTGTATGATAAAGAAGCTTTGAAGCAATTGGATATGAAGGGACTAAAAAGAAAAGTTGGACAAGACTTAACTTGTTTAGGTGTAGAATGTTATAGGATGCCATTTTTCATAATCACAGCATCAACATTAGTTGCTTGTTTTGTCTCATTTCTTTTGGTGCTGAGGACTAGGGAATTCTATAAAGGTGACATTTATAAGAAGTTTAGGGTGGAAACTCAGACAAATGAGGCAGAGATGGGAGCTACAAAAGCTGAAAATCTTGCAGCCACTACCACAAGCAGCATAGATGTGTCGTCACATAATAATAAAGACAATGTAAAGTGA 1734 0.4152 MIFASCLIMAVSGATYMFGLYSNEVKSSLGYDQSTLNLISFFKDLGANLGIFSGLINELTPPWVILSIGAAMNFFGYFMVWLSVSGHIAVPHVWQMCLYFYIGANSQSFANTGALVTCVKSFPRSRGSVIGLLKGYVGLSGAIFTQLYHAFYGDDSKALILLIGYLXXXXLPTVRIMDIVPQPKELRVFYKLLYISLAVAGFLMVLIVLQNRLSFSRVEYIVDGVFVLFLLLLPLVVVFREELKLLKNHHNINDASSSSYSSSGFKVVTQVPSPSANELPQLESQVAPNSSRTSCLSNIFKPPSRGEDYTILQALFSIDMLILFIATTFGVGGTLTALDNLGQIGNSLGYPKKSLTTFVSLVSIWNYLGRAMSGFASEIFLKKYKFPRPLMLSLVMLLSCVGHILIALGIPNSLYFASVIIGFCFGAMWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVKVTGYLYDKEALKQLDMKGLKRKVGQDLTCLGVECYRMPFFIITASTLVACFVSFLLVLRTREFYKGDIYKKFRVETQTNEAEMGATKAENLAATTTSSIDVSSHNNKDNVK 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120864g00017 577 CDD MFS_Mch1p_like 1 516 - -
Stsc120864g00017 577 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 535 - -
Stsc120864g00017 577 Pfam Nodulin-like 1 239 IPR010658 -
Stsc120864g00017 577 Gene3D MFS general substrate transporter like domains 316 531 IPR036259 -
Stsc120864g00017 577 Pfam Major Facilitator Superfamily 323 528 IPR011701 GO:0022857|GO:0055085
Stsc120864g00017 577 SUPERFAMILY MFS general substrate transporter 2 528 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120864g00017 Stsc-Chr120864 78670 81439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120864g00017 1 539 Nodulin-like Gene Family AT2G39210 61.679 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120864g00017 - - gmx:100814000 820.846