Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120863g00013 ATGATCTGCACGGTGAAACAACCCAGTGTTACTGGGATCAGAACCTCTGGGCTTGTTTTTCGTGAAAAGGGTCCAATTCAGGTTCAGTTACCTTCCATGATCACAACAAGAGAGAAGAGATCACTGAGATCCCTTGTTTCGGTGCAGAAGCCACTGCACCTTTCTGCTGTAATTGGTGGTGTTGGGAAGCTTTCACTTCCAGTGAGGCGTGAGAAGAGTGAGTTTGTGACTTGCAGTGCATATGAGGCTGATAGATCAGAGCTTGAAGGAGAAGGAGCAGCTTCTCCTAAGGTTCCATCAGAGGCAGCTAAGAAGGTGAAGATTGGGATATACTTTGCAACATGGTGGGCTTTGAATGTGGTGTTCAATATATACAACAAGAAGGTGTTGAATGCTTACCCTTACCCTTGGCTCACTTCAACACTCTCACTTGCATGTGGCTCTCTCATGATGTTGATCTCATGGGCCACAGGGATTGCTGAGGCTCCTAAGACTGACCTTGATTTTTGGAAGACCTTGTTCCCTGTTGCTGTGGCACATACAATAGGACATGTAGCAGCAACAGTTAGTATGTCAAAGGTTGCAGTGTCATTCACTCATATCATCAAGAGTGGGGAACCTGCTTTCAGTGTACTGGTTTCCAGATTTATCTTGGGCGAAACCTTCCCGGTGCCGGTTTATTTGTCTTTGCTTCCAATCATTGGTGGTTGCGCGCTTGCTGCTGTGACTGAGCTCAATTTCAACATGACCGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTTTTCCGCAACATCTTTTCAAAGAAGGGGATGAAGGGAAAGTCTGTCAGTGGAATGAATTACTACGCTTGTTTATCGATGTTGTCATTGGTAATTCTCACACCGTTCGCAATTGCAGTGGAGGGGCCACAAATGTGGGCAGCTGGATGGCAAACCGCCCTCTCTCAAATCGGACCTCAGTTTATATGGTGGGTGGCAGCTCAGAGTGTATTTTATCATTTGTACAATCAGGTGTCCTACATGTCTTTGGATGAGATCTCTCCTTTGACATTTAGCATTGGAAACACCATGAAGCGTATATCTGTAATAGTTTCTTCCATCATTATCTTCCATACACCAGTTCAACCCATCAACGCGCTGGGAGCCGCCATTGCCATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAA 1200 0.455 MICTVKQPSVTGIRTSGLVFREKGPIQVQLPSMITTREKRSLRSLVSVQKPLHLSAVIGGVGKLSLPVRREKSEFVTCSAYEADRSELEGEGAASPKVPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAEAPKTDLDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLVILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120863g00013 399 Pfam Triose-phosphate Transporter family 107 395 IPR004853 -
Stsc120863g00013 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 150 242 - -
Stsc120863g00013 399 PANTHER SOLUTE CARRIER FAMILY 35 107 398 - -
Stsc120863g00013 399 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 398 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120863g00013 Stsc-Chr120863 68009 71087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120863g00013 1 398 Antiporters AT5G54800 76.427 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120863g00013 K15283 - gmx:100801832 610.142