Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120859g00002 ATGGCGAGAAAGAATGAAGGACATGCAGTGGGAATTGACCTTGGCACGACATACTCTTGTGTTGCAGTATGGCAGGAGCAACATTGTCGTGTTGAGATCATTCATAATGACCAGGGCAACAAAACGACACCTTCCTACGTTGCTTTCACTGCGAATCAAAGGTTTATTGGAGATGCTGCTAAGAACCAGGCTGTCGCTAACCCAACTAACGCTGTCTTTGATGCGAAGAGATTGATAGGTAGAAAATACAGTGATCCGGTTGTCAAGAATGATATCCCGATGTGGCCATTTAAGGTCACTGCTGGCAATGATGATAAACCAATGATTGTTGTTACATACAAGGATCAAAAGAAGCACTTTTCTGCAGAAGAAATCTCATCTATGGTTCTCACTAAGATGCGCCAGATTGCGGAAGCATACTTAGAGGCACCTGTTTGTAACGCTGTTATTACGGTACCTGCTTATTTCAATGGCTCTCAGCGTAAAGCTACCAGAGATGCCTGCATCATTGCAGGTATCAATGTAATGCGAATGATTAATGAGCCAACGGCTGCTGCAGTTGCATATGCCCTTGGCAAAAGATCTGCTTGCCTCAAGGAACGTAATGTGTTCATCTTTGATCTTGGTGGGGGTACTTTCGATGTTTCTCTCCTTACTATTAAGGGCAAGAAAATCAAAGTTCTGGCCACTGCCGGAAACACTCACCTCGGTGGAGAGGATTTTGTTAGCAGACTAGTGAGTTACTTTGTTAAGGAATTCGAGAGAAAGAACAAGGTTCACATTAGTGGCAATGCCAGAGCCTTAAGGAGATTGAGAACTGCTTGTGAGAAGGCCAAGAGGATCTTATCTTTTGCAGTTACAGCCTCCATTGAGTTAGATGCTTTCTTTAAAGGCATTGACTTCTATTCATCAATCACGCGTGCTAGATTCGAAGAACTTAACATGGACCTCTTTAGAGAGTGCTTGAAAACGGTAGATAGATGCATCTCTGATTCAAATATGGGCATTTCAAGTGTACATGATGTGGTGCTTGTTGGTGGCTCTTCTAGGATTCCTAAAGTGCAGGAGATGTTGCAAGAATTTTTCAAGGGAAAGGAGCTTTGTAAGAGTATCAATCCTGATGCAGCTCTTTCGGCTGCTATGTTAAATAGAGGCACTGAGAGTAGTGCCCCAAATTTGGTGCTGCAGGATGTTACTCCTCTGTCTCTTGGTAAAGCTACAAGAGGAGATATTATGAGCGTTGTGATTCCAAGGAATACTACCATTCCTGTGAAGAAATCAGCAACTTTCTACACAGACTATGACAACCAATCATCTGTGCTTGAAGAGATTTATGAAGGTGAGAGGACAAGAGCCAGCGATAACAACTTGCTTGGTCAATTTACACTTTTAGGAATCCCTCCTGCTCCTAGAGGCCATCCTGTATCGATATGCTTCGATTTAGATGCCGATGGCATCCTATGTGTAACTTCTGAGGAGAAGACCACTGGCATTAAAAACCAGATTACCATAACAAATGATAAAGGAAGATTTTCGCGGGAAGAAATCGAAAGGCTCATTGAGGAAGCTGAGAGATACAAGGTTGAAGATGAGAAGTTTCTTGAGAAAGCTAATGCAATGAATGCTTTGGATGATTATGTTTATGGCATGGAGAAAGCCTTAATCGGTTCTAATCTTTGTCCTATGGATAAGAAGAAGCTAAATTCTGCAATTGTTAAGGCCAGAAATTTGCTTCATGATGGTAATAAGGAGAACATAGAAACTGATGTGTTTGTGAAGCATCTTAACCAAGCTAAACTAATTTTTGAGCACATTATAGATAAGACTGGAGGTTGTGGTGGTGAGGCTGGCGGCGATGGAAGTTGGGACTGTGGTGGCCGGAGGTGGAAGATCCATGGTGGTGATGAATTTTGGGTGGTGGTGGGGTTGGAGATTGGGTGTGGTGGCTTTATGAAATAA 1959 0.4267 MARKNEGHAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNKTTPSYVAFTANQRFIGDAAKNQAVANPTNAVFDAKRLIGRKYSDPVVKNDIPMWPFKVTAGNDDKPMIVVTYKDQKKHFSAEEISSMVLTKMRQIAEAYLEAPVCNAVITVPAYFNGSQRKATRDACIIAGINVMRMINEPTAAAVAYALGKRSACLKERNVFIFDLGGGTFDVSLLTIKGKKIKVLATAGNTHLGGEDFVSRLVSYFVKEFERKNKVHISGNARALRRLRTACEKAKRILSFAVTASIELDAFFKGIDFYSSITRARFEELNMDLFRECLKTVDRCISDSNMGISSVHDVVLVGGSSRIPKVQEMLQEFFKGKELCKSINPDAALSAAMLNRGTESSAPNLVLQDVTPLSLGKATRGDIMSVVIPRNTTIPVKKSATFYTDYDNQSSVLEEIYEGERTRASDNNLLGQFTLLGIPPAPRGHPVSICFDLDADGILCVTSEEKTTGIKNQITITNDKGRFSREEIERLIEEAERYKVEDEKFLEKANAMNALDDYVYGMEKALIGSNLCPMDKKKLNSAIVKARNLLHDGNKENIETDVFVKHLNQAKLIFEHIIDKTGGCGGEAGGDGSWDCGGRRWKIHGGDEFWVVVGLEIGCGGFMK 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120859g00002 652 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 383 558 IPR029047 -
Stsc120859g00002 652 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Stsc120859g00002 652 FunFam heat shock 70 kDa protein-like 73 128 - -
Stsc120859g00002 652 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 391 544 IPR029047 -
Stsc120859g00002 652 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Stsc120859g00002 652 FunFam Heat shock 70 kDa 237 320 - -
Stsc120859g00002 652 Gene3D - 73 128 - -
Stsc120859g00002 652 PANTHER HEAT SHOCK PROTEIN 70KDA 9 571 IPR013126 GO:0005524|GO:0140662
Stsc120859g00002 652 FunFam Heat shock 70 kDa protein 386 540 - -
Stsc120859g00002 652 SUPERFAMILY Actin-like ATPase domain 199 377 IPR043129 -
Stsc120859g00002 652 Gene3D - 10 377 - -
Stsc120859g00002 652 FunFam Heat shock protein 70 10 202 - -
Stsc120859g00002 652 Gene3D Actin; Chain A, domain 4 237 320 - -
Stsc120859g00002 652 Gene3D - 194 368 - -
Stsc120859g00002 652 PRINTS 70kDa heat shock protein signature 148 168 - -
Stsc120859g00002 652 PRINTS 70kDa heat shock protein signature 211 221 - -
Stsc120859g00002 652 PRINTS 70kDa heat shock protein signature 339 355 - -
Stsc120859g00002 652 PRINTS 70kDa heat shock protein signature 392 411 - -
Stsc120859g00002 652 PRINTS 70kDa heat shock protein signature 8 21 - -
Stsc120859g00002 652 PRINTS 70kDa heat shock protein signature 38 50 - -
Stsc120859g00002 652 PRINTS 70kDa heat shock protein signature 60 68 - -
Stsc120859g00002 652 PRINTS 70kDa heat shock protein signature 472 488 - -
Stsc120859g00002 652 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Stsc120859g00002 652 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Stsc120859g00002 652 Coils Coil 516 536 - -
Stsc120859g00002 652 Pfam Hsp70 protein 9 590 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120859g00002 Stsc-Chr120859 9418 11793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120859g00002 1 623 Calmodulin-binding Proteins AT3G12580 61.732 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120859g00002 K03283 - gmx:102667578 818.535