Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120857g00025 ATGGCCAATAAAACTAGTATTTGTTCCTTCTCCATGGCTATCATCCTGACTATGCTACCATGTCTATGTCTTATACAGCAAGAAGCCATGGCCGCCAACACAAACAAGACTTACATAGTTCAAATGAAACACAAACACAACCCTTCCAAACACCCCACGCATAGAGACTGGTACGAAGCAACACTCCAATACCATAACTCTCACTCCGATTCGCTCCTCTACTCATACAAAACCGCCTATAACGGTTTTGCCGCTTCTCTCAACGATCACCAGGCACAGTTACTCCGCCGTTCCGATTCGGTGCTTGCGGTTTACGAGGACACACTCTACACCCTCCACACAACAAGGACACCGGAGTTCTTGGGCCTCCAAAAGGGTTTAAACCTGTGGGAAGGCCACACCATTCAGGATCTTGACCATGCTTCCAACGACATCATCATCGGAGTCCTCGACACCGGGGTGTGGCCCGAGGCCAAGAGCTTCGATGATTCCGCCATGCCTCCCGTTCCCACAAGGTGGCGAGGGCAATGCGAGTCCGCTCCGGATTTCGATCCTTCAGTCTGTAATAGAAAGCTCATCGGCGCCAGGACTTTCTCCAAGGGCTACTTATTGTCCTCCGGCGGCGGTTATATGGTTAGGGAAAAGGAGCAAGTGTCTCCACGCGACCGTGACGGACATGGAACCCATACTGCCACTACTGCTGCTGGCTCCGCCGTCCCCAATGCCACTCTGCTTGGTTACGCAACCGGAACGGCGCGTGGTATGGCACCACAGGCTCGCGTCGCGGCTTACAAGGTCTGCTGGACAGGCGGCTGCTATGGCTCAGACATTCTTGCGGGGATTGACCAAGCCATCCAGGACGGCGTCGACGTGCTCTCGCTCTCTCTCGGCGGCTCCTCAACCGCCTACCACCGCGACACCATTGCCATCGGAACCTTCGCGGCTGTGCAGAAAGGAATCTTCGTGGCCTGCTCGGCAGGGAACAGCGGTCCTCGACAGGGATCTATCGCCAATGTGGCACCCTGGGTCATGACCGTCGGAGCCGGAACCCTAGATCGGGATTTTCCTGCTTATGTTAAAATCGGAAACGGAAAACGATTAAGTGGTGTTTCTCTTTACGGTGGAGAAGGTATAGGAGACGAACCAGTGGGTTTGGTTTACTTCACCGATAAATCCAATTCGTCGAGCAGCGTTTGCATGCCCGGTTCGCTGGAATCATCGCTGGTGCGAGGGAAGGTGGTGGTTTGCGACAGAGGGCTGAACGCGCGCGCGGAGAAGAGCGCGGTGGTGAGAGAAGCTGGAGGTGTGGGGATGATACTAGCGAACACTGCGGCGAGCGGCGAGGAAGTGGTGGCGGACAGCCACCTTGTGCCGGCCGTAGCGGTGGGGAGAAGCGCGGGAGATGAGATCAGAGAGTACGCTTCGTTGGATCCTAATCCAACGGCTGTGCTTAGCTTCGGTGGAACTGTTCTGAACGTGAGGCCTTCCCCTGTTGTGGCGGCCTTCAGTTCTCGTGGGCCTAATGGAGTGAGTCCTCAGATTCTAAAGCCCGATATTATTGGGCCTGGAGTTAACATTTTGGCGGGATGGTCCGAGGCTGTTGGTCCATCTGGGTTATCGAAGGACACTCGCAAAACCCAATTCAACATCATGTCAGGTACGTCAATGTCGTGTCCACACATAAGCGGGTTGGGTGCATTGTTGAAAGCAGCACATCCAGATTGGAGTCCAAGTGCTATTAAATCGGCACTCATGACAACAGCTTCTACACTCGACAACACAAACTCCCCTCTTAAGGATGCTGCCAGAGGAGGAGGAGGAGGAGAGTCATCAACGCCCTGGGCTCACGGTGCTGGCTATGTGAACCCACAAAAGGCATTCTCTCCAGGGCTTGTGTACGACGCAACCACCGATGATTACGTTGCCTTCTTGTGCTCCTTGGACTACTATACGCCTGAGACTATACAGCTTATTGTTAAGAATCCCAATGCGAATGTGAATTGTTCGGTGAGATATGATGATCCAGGGCAGTTGAATTACCCGTCGTTTTCGGTTGTGTTTGGGAGCAAGAAGAGGGTTGTTACATTCACTAGGACGCTGACCAATGTGGGGGCAGCAGGATCCGTGTATGATGTGGATGTGGATACCCCATCCTTGGTGGCAATTACGGTGAAGCCCACAAGGCTTGTGTTCCCCCAAGTTGGGGATAAACAAACTTACACAGTCACCTTTGTGTCCAACAACACTGCTCATGATGATTATTCGCTTCTTTCCAAATTCGGCACCATTGTGTGGAGCAATCAACAGCATCAAGTTAGGAGCCCCCTTGCTTTTGCATGGATCCATGATTCCTGA 2355 0.5312 MANKTSICSFSMAIILTMLPCLCLIQQEAMAANTNKTYIVQMKHKHNPSKHPTHRDWYEATLQYHNSHSDSLLYSYKTAYNGFAASLNDHQAQLLRRSDSVLAVYEDTLYTLHTTRTPEFLGLQKGLNLWEGHTIQDLDHASNDIIIGVLDTGVWPEAKSFDDSAMPPVPTRWRGQCESAPDFDPSVCNRKLIGARTFSKGYLLSSGGGYMVREKEQVSPRDRDGHGTHTATTAAGSAVPNATLLGYATGTARGMAPQARVAAYKVCWTGGCYGSDILAGIDQAIQDGVDVLSLSLGGSSTAYHRDTIAIGTFAAVQKGIFVACSAGNSGPRQGSIANVAPWVMTVGAGTLDRDFPAYVKIGNGKRLSGVSLYGGEGIGDEPVGLVYFTDKSNSSSSVCMPGSLESSLVRGKVVVCDRGLNARAEKSAVVREAGGVGMILANTAASGEEVVADSHLVPAVAVGRSAGDEIREYASLDPNPTAVLSFGGTVLNVRPSPVVAAFSSRGPNGVSPQILKPDIIGPGVNILAGWSEAVGPSGLSKDTRKTQFNIMSGTSMSCPHISGLGALLKAAHPDWSPSAIKSALMTTASTLDNTNSPLKDAARGGGGGESSTPWAHGAGYVNPQKAFSPGLVYDATTDDYVAFLCSLDYYTPETIQLIVKNPNANVNCSVRYDDPGQLNYPSFSVVFGSKKRVVTFTRTLTNVGAAGSVYDVDVDTPSLVAITVKPTRLVFPQVGDKQTYTVTFVSNNTAHDDYSLLSKFGTIVWSNQQHQVRSPLAFAWIHDS 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120857g00025 784 Pfam Subtilase family 143 596 IPR000209 GO:0006508|GO:0008236
Stsc120857g00025 784 ProSiteProfiles Serine proteases, subtilase domain profile. 124 627 - -
Stsc120857g00025 784 FunFam subtilisin-like protease SBT1.5 352 491 - -
Stsc120857g00025 784 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Stsc120857g00025 784 Pfam PA domain 399 470 IPR003137 -
Stsc120857g00025 784 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Stsc120857g00025 784 CDD PA_subtilisin_like 358 482 - -
Stsc120857g00025 784 Gene3D - 644 780 - -
Stsc120857g00025 784 FunFam Subtilisin-like protease SBT1.9 26 113 - -
Stsc120857g00025 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 777 IPR045051 -
Stsc120857g00025 784 Gene3D Peptidase S8/S53 domain 144 640 IPR036852 GO:0004252|GO:0006508
Stsc120857g00025 784 SUPERFAMILY Subtilisin-like 112 631 IPR036852 GO:0004252|GO:0006508
Stsc120857g00025 784 FunFam Subtilisin-like protease SBT1.5 144 362 - -
Stsc120857g00025 784 Pfam Fibronectin type-III domain 677 777 IPR041469 -
Stsc120857g00025 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 113 IPR037045 -
Stsc120857g00025 784 SUPERFAMILY Protease propeptides/inhibitors 35 112 - -
Stsc120857g00025 784 CDD Peptidases_S8_3 110 589 IPR034197 -
Stsc120857g00025 784 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Stsc120857g00025 784 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Stsc120857g00025 784 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Stsc120857g00025 784 Gene3D - 352 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120857g00025 Stsc-Chr120857 123230 126071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120857g00025 35 780 Subtilisin-like Serine Gene Family AT2G05920 64.840 0.0 978
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120857g00025 - - adu:107457896 1361.67