Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120857g00008 ATGGATATGCAAGCACGTAACCATAATTACCATTTTGCCCTCCTCCTGCTATTCTTGTTTCTGTCGTGGTACTCCGCGACGGCGCAAGATCTGGTCCGTTCATCGTGCGCCCACGCAAGGTACCCGGCCCTCTGCATCAAAACCCTAACCCCATACGCCACTCCGTCCGCCACCGCCTTGGACCTCGCTAAATCCGCTGTTAGGGTTAGCCTCGCCCACTCTCGCTCACTCTCCACGTACGTCACCACTCTTCACTCTCAGATGCAGCAACAGTCCTCTTCTTCCGCGGAGCGAGTCGCACTCAACGACTGCATCGCTCAAATCGCAGACTCCGTTGATGAGTTCACCCGGACGCTTAGCGAGTTGAAGAACATGCAGGTGGGAACGACATCGTTCCAGTGGCACATGAGCAACGCCCAGACGTGGACTAGCACCTCCTTGACCAACTGTTACTCTTGCATGAATGGATTTGGCGGTGTCGTCAGCAAGGTTGGGTTGGACGTGAAGCAGAGAGTGAACAGCTTAGGAATGCTCACCAGCAACGCGCTTTACCTCATCACCAGAATCGGTGGTGCTGCTAATGGCGTTCGTGGAGGCAACTGA 603 0.5506 MDMQARNHNYHFALLLLFLFLSWYSATAQDLVRSSCAHARYPALCIKTLTPYATPSATALDLAKSAVRVSLAHSRSLSTYVTTLHSQMQQQSSSSAERVALNDCIAQIADSVDEFTRTLSELKNMQVGTTSFQWHMSNAQTWTSTSLTNCYSCMNGFGGVVSKVGLDVKQRVNSLGMLTSNALYLITRIGGAANGVRGGN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120857g00008 200 Pfam Plant invertase/pectin methylesterase inhibitor 30 184 IPR006501 GO:0004857
Stsc120857g00008 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 189 IPR035513 -
Stsc120857g00008 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 191 IPR035513 -
Stsc120857g00008 200 SMART PMEI_2 27 185 IPR006501 GO:0004857
Stsc120857g00008 200 NCBIfam pectinesterase inhibitor domain 8 187 IPR006501 GO:0004857
Stsc120857g00008 200 CDD PMEI-like_3 34 191 - -
Stsc120857g00008 200 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120857g00008 Stsc-Chr120857 48263 48957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120857g00008 25 157 Carbohydrate Esterase AT3G14310 26.667 5.03e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120857g00008 - - aip:107637505 284.263