Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120857g00003 ATGGCGAAAGGAGGGAAGCTTACGAAGCTGAGGTCTGTGCTTAAGAAATGGAACTCATTTGGCAGCAATAGCAGCAAGCAGAGTCGCCACAACAGCAGCGCCGTGGCAGACGAGGATGACAAGAGAGAGCTCCACACGGTGTACGTTGGCAAGTCTCGGCGGCTGTACCGGGTGTCGTCGGAGGTGGTGGAGCACCCTGTGTTCAGAGAACTGGTGGAGAGGTCACGTGAGGAGCAGGAGGAGGAGGATGAGGAAGTGGGAAGGAGCGTTGCCTGCGAGGTGGTTCTGTTCGAGCATCTTCTTTGGATGCTCGAAAATGGCGATCCACAACCGGACGAACTTGTTGACTTCTATGCTTGCTAG 363 0.5537 MAKGGKLTKLRSVLKKWNSFGSNSSKQSRHNSSAVADEDDKRELHTVYVGKSRRLYRVSSEVVEHPVFRELVERSREEQEEEDEEVGRSVACEVVLFEHLLWMLENGDPQPDELVDFYAC 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120857g00003 120 MobiDBLite consensus disorder prediction 19 39 - -
Stsc120857g00003 120 Pfam Auxin responsive protein 15 104 IPR003676 GO:0009733
Stsc120857g00003 120 PANTHER EXPRESSED PROTEIN 19 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120857g00003 Stsc-Chr120857 22331 23014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120857g00003 3 120 Calmodulin-binding Proteins AT4G34750 27.907 1.98e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120857g00003 - - gmx:100792286 144.821