Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120856g00029 ATGGGTGCTTATGATCAAGGTTCTAATAATATCAGTCTAGTACCCTTGGACTCTTCTAGAAAGAGGAAAAGTAGGAGTAGAAGAGACGGGTCTAGATCTGTAGCTGAGACTCTGCAGAAATGGAAGATATACAATGAGACTCTTCAGTCCGGTAAAGAGGAAGGCAAGCCAACAAGAAAGGCGCCGGCAAAGGGTTCGAAGAAAGGGTGCATGAAAGGGAAAGGAGGACCCCAAAATTCACAGTGTAATTACAGGGGTGTTAGGCAGAGGACATGGGGGAAATGGGTTGCCATGTATGGTTCAAGTGCGAGGCTAAACTTCCCGCACATCACGGATTATAGTTCCATTAAGGAGTCAATGAAGGACTCTTCAGTGGCTGCAACTACTTCTTGTTCCAGTTCTTCAGCTGCAACTCCTGCAGCTTCTGACACGACTACTATATCAAATCATTCGGAGATTTGTGCGGCTGAGGATGTTAAGGAGCAAGTGCGGCTTGGCGAGGTGAATGGTACTGTTAATGTCTTTCATCAGGCTTATGACTCTGTTGCTTCCCCAACTAGCAAAGTGAAGCAAGAGATACTGGAAGAGCCTGAGGTTCTCACTGACCCTGGGGGAGTTGAAATCCAGAATTTACAACTTGGTGATGGACAAGTTGCCATGGATGATGTAAATAAAGATCAGATGGATTTGTCCTGGATTGATAATTTTGACTTCGAAAGTGGTGATTACTTGAAGAACTTCTCCATGGATGAGCTATTCCAGGTGGAGGAGCTTCTAGGGGACATAGACAAAAATCCAATTGAGGACTCTGCATTGATGCAAGCCTTGGATTTTGGTCAAATGGATGATAAAGGTCTGGATTTCAGTCAAATGAATTTCCCTGTTGACAGTAGTCATCAAGCTGACATGCCTTCAAGCTATTTGTATCAGTTGGAGAATCCGGATACCAAGTTGTTGGGAAGTTTGCCCCATATGGAACAAATTCCATTGGATGCTGATTATGGCTTGGATTTCCTAAAAGCAGAATCGGAGAAATGTAATAATGGTGGCAGTGGCGGGGAAGAACATCGCTTTATAGATTTGAAATGTCTGAACAATGACCCAAAAGGTAATATGCAAACAAAGAAGGATGATTAG 1137 0.4362 MGAYDQGSNNISLVPLDSSRKRKSRSRRDGSRSVAETLQKWKIYNETLQSGKEEGKPTRKAPAKGSKKGCMKGKGGPQNSQCNYRGVRQRTWGKWVAMYGSSARLNFPHITDYSSIKESMKDSSVAATTSCSSSSAATPAASDTTTISNHSEICAAEDVKEQVRLGEVNGTVNVFHQAYDSVASPTSKVKQEILEEPEVLTDPGGVEIQNLQLGDGQVAMDDVNKDQMDLSWIDNFDFESGDYLKNFSMDELFQVEELLGDIDKNPIEDSALMQALDFGQMDDKGLDFSQMNFPVDSSHQADMPSSYLYQLENPDTKLLGSLPHMEQIPLDADYGLDFLKAESEKCNNGGSGGEEHRFIDLKCLNNDPKGNMQTKKDD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120856g00029 378 MobiDBLite consensus disorder prediction 18 35 - -
Stsc120856g00029 378 MobiDBLite consensus disorder prediction 1 82 - -
Stsc120856g00029 378 MobiDBLite consensus disorder prediction 1 17 - -
Stsc120856g00029 378 MobiDBLite consensus disorder prediction 47 61 - -
Stsc120856g00029 378 SMART rav1_2 83 114 IPR001471 GO:0003700|GO:0006355
Stsc120856g00029 378 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 97 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120856g00029 Stsc-Chr120856 195306 197732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120856g00029 8 361 AP2-EREBP Transcription Factor Family AT2G40340 32.051 6.07e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120856g00029 - K09286 gmx:100800134 370.933