Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120856g00014 ATGTCTCCATCAACATTCAAAGCCACAATGAAATTGGAACCCAACACAAACACAGCCACCCAAGTTGCTGTCCCTCTCCTCCAGGACTCCCAACAACATCCCCAGCAACATCAGCATGGCTCCATTTCCGGGGCAGTCTTCAACATCTCAACCACCATGATCGGTGCCGGAATCATGTCGGTTCCGGCAACCATGAAGGTTCTGGGCATACTTCCTGGCTTCTTTGTCATTGTTTTTGTTGCCCTCATCACCGATGTAACCGTCGAGTTCATGTTGAGGTACACCGCACATGGAAAATCTCTTACATATGCTGCCATGGTTGGTGAATCATTTGGCTCATTGGGTTCCCTTGCTCTCAAGATTTGTGTCATAATCACAAACCTCGGTGTTCTTATCATTTACTTCATTGTTCTTGGAGACGTGCTATGTGGAAATGAATCCAAAGGAGTCACACATTTGGGGATCCTTCAAGAATGGTTTGGGATCCACTGGTGGACCTCGCGTGCTTTTGCTCTTCTTATAGTTGCTCTTTTCATAATGCTCCCACTTGTTATGTTACGCCGTGTTGATTCATTAAGGTACAGTTCAGCAATATCAATCCTACTAGCATTGGTGTTTGTTGCAATATGCTCTTCCATGGCTTTCTATGCATTGTGGTGCGGCAAAACTCAGCCACTCAGGATTCTTCCTGATTTCTCTCAAGTCACTCTCCTTGATCTTTTCACCACTGTCCCCGTCTTTGTCACCGGTTTCGGATTTCACGTCAACGTTCATCCAATAAGAGCAGAGCTAGGAAAACCAGGGGACATGAATTTGGCAGTGAGGATTTCATTGATCATATGTGTAGCCATATACTTTGCAATTGGATTTTTTGGTTACCTTTTATTTGGAGACTCAATCATGGCAGATATGTTAGTCAACTTTGACCAAAACTCCAACACAAGTGCTGGTAGATTCCTCAATGACATTGTTAGGTTAAGCTATGCACTCCACCTTGCACTTGTTTTCCCCATCATGAATTATTCCTTGAGGGCCAACATTGATGAACTCATTGCATTCTCAACTAATAATAATAATAACAACAACAATAGGGTTCCTCTTGCATTAGACACACCAAGATTTGTGTCATTGACTCTTGGATTGTTAGCATTCACATATGTGATGGCAGTGGCAATTCCAAACATATGGTATTTCTTTCAGTTCTTGGGCTCCACTACCATTGTTTGCCTCTCCTTCATTTTCCCTGCCTCAGTCATTCTAAGGGATATGCATGGCATATCAAGGACAAAGGATCAAGCGATGGCAATAGTGGTGATTGTTTTGGCTTTAGGGACTAGTGGAATTGCTATATGGTCCAACTTGAATGGTTGA 1371 0.4318 MSPSTFKATMKLEPNTNTATQVAVPLLQDSQQHPQQHQHGSISGAVFNISTTMIGAGIMSVPATMKVLGILPGFFVIVFVALITDVTVEFMLRYTAHGKSLTYAAMVGESFGSLGSLALKICVIITNLGVLIIYFIVLGDVLCGNESKGVTHLGILQEWFGIHWWTSRAFALLIVALFIMLPLVMLRRVDSLRYSSAISILLALVFVAICSSMAFYALWCGKTQPLRILPDFSQVTLLDLFTTVPVFVTGFGFHVNVHPIRAELGKPGDMNLAVRISLIICVAIYFAIGFFGYLLFGDSIMADMLVNFDQNSNTSAGRFLNDIVRLSYALHLALVFPIMNYSLRANIDELIAFSTNNNNNNNNRVPLALDTPRFVSLTLGLLAFTYVMAVAIPNIWYFFQFLGSTTIVCLSFIFPASVILRDMHGISRTKDQAMAIVVIVLALGTSGIAIWSNLNG 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120856g00014 456 PANTHER AMINO ACID TRANSPORTER 31 442 - -
Stsc120856g00014 456 Pfam Transmembrane amino acid transporter protein 40 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120856g00014 Stsc-Chr120856 93250 96595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120856g00014 21 454 Amino Acid or Auxin Permease AAAP Family AT3G56200 50.345 4.46e-148 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120856g00014 - - ahf:112765408 777.319