Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120856g00002 ATGGCTTCATTTTGTTCTAATATGATTCGTTTGTTTCTCGTTGTCCTTGTTGTGTTGGGTAGTGCCAATGCACAACTTTCCAAAGATTTCTATTCAAGTTCATGTCCAAAACTCCTTGACACTGTGAAATGCACAGTGGAAGCTGCCATAGCTAAAGAGACTCGCATGGGTGCTTCTCTCCTACGTTTGTTCTTCCATGATTGTTTTGTTAATGGATGTGACGGTTCAATTCTTCTGGACGATACATCAAGCTTCACGGGAGAGAAGAATGCGGGCCCTAACAAGAACTCCGCCCGGGGATTCGAAGTCATCGACGCTATCAAGTCCGCCGTTGAGAAAGTCTGCCCTGGTGTTGTCTCCTGCGCTGATATCCTCGCCATTGCTGCCAGAGATTCCGTCAACATCCTTGGAGGCCCTGCATGGGACGTAAAACTGGGAAGAAGAGACGCAAGAACAGCGAGTCAAGCTGCTGCCAACAAAGGGATCCCAGCACCAACTTCAAGCTTAAATCAACTCATCTCAACCTTCGCTAATCTTGGGCTTTCCACCAGGGACATGGTCGCCTTGTCTGGTGGTCACACAATTGGACAAGCAAGGTGTACAACCTTCAGATCCCACATCTACAATGAGACCAACGAGTTATTAGCATCCTTTGCTCAAACAAGGCAATCAAAATGCCCTAGGCCATCCGGTGTTGGGGACAACAACCTTGCTCCCCTTGATCTCCAGACGCCGGCGTCCTTTGACAACCACTACTTCAACAACCTCATCGACCGGAAAGGCCTCCTCCACTCCGACCAGCAACTCTTCAACGGAGGATCCACCGACTCCATTGTTCGCGGATACAGCACAAACCCTAGCTCGTTTTTCGCCGATTTTGCCAGTGCCATGATCAAGATGGGAGACATAAATCCCCTCACTGGATCCCAGGGAGAGGTTAGAAAGAATTGCAGGAGGGTCAACTAA 966 0.4907 MASFCSNMIRLFLVVLVVLGSANAQLSKDFYSSSCPKLLDTVKCTVEAAIAKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNAGPNKNSARGFEVIDAIKSAVEKVCPGVVSCADILAIAARDSVNILGGPAWDVKLGRRDARTASQAAANKGIPAPTSSLNQLISTFANLGLSTRDMVALSGGHTIGQARCTTFRSHIYNETNELLASFAQTRQSKCPRPSGVGDNNLAPLDLQTPASFDNHYFNNLIDRKGLLHSDQQLFNGGSTDSIVRGYSTNPSSFFADFASAMIKMGDINPLTGSQGEVRKNCRRVN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120856g00002 321 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Stsc120856g00002 321 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 FunFam Peroxidase 29 174 - -
Stsc120856g00002 321 Gene3D Peroxidase, domain 2 163 300 - -
Stsc120856g00002 321 CDD secretory_peroxidase 25 320 IPR033905 GO:0004601|GO:0042744
Stsc120856g00002 321 SUPERFAMILY Heme-dependent peroxidases 25 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 PANTHER PEROXIDASE 72-RELATED 22 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 ProSiteProfiles Plant heme peroxidase family profile. 25 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 FunFam Peroxidase 163 300 - -
Stsc120856g00002 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Stsc120856g00002 321 Pfam Peroxidase 43 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc120856g00002 321 Gene3D - 29 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120856g00002 Stsc-Chr120856 19718 22241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120856g00002 24 321 Peroxidase AT5G05340 76.510 4.13e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120856g00002 K00430 - gmx:100803637 518.079