Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120855g00029 ATGCTTCCTCCTTCCCGTCGAGAGTTCAAGGATATCTACGTTGTGTTTGAGTTGATGGAATCTGATCTTCATCAAGTAATTAAGGCCAACGATGATCTTACTCCTCAGCATCACCAATTTTTCTTGTACCAGCTTCTTCGTGGCCTCAAGTATATACACACAGCAAATGTTTTTCATCGTGACTTAAAACCCAAAAATATCCTTGCCAATGCTGATTGCAAACTCAAGATATGCGATTTTGGACTTGCTCGTGTTTCTTTTAATGACGCACCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGCTGGTACCGGGCACCTGAGCTGTGTGGTTCTTTTTTCTCTAAATATACCCCTGCAATTGATATCTGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGTAAGCCATTATTTCCGGGTAAAAATGTCGTGCATCAATTGGATCTCATGACTGATTTGCTTGGCACTCCTCCCCCTCACTCCATTGCAAGGATTCGAAATGAGAAAGCTAGAAGATATCTTAGTGGCATGCGAAAGAAGCAACCAGTTCCATTGTCTCAAAAATTTCCCTCTTCGGATCCATTGGCTCTTCGTTTACTGGAGCGATTACTTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCTTTAGCTGATCCTTATTTCCGAGGCTTGTCGAATGTGGATCGTGAGCCATCCACTCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGGAAATTGACCAAAGATGATGTTAGAGATTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAGATGCTCCAGGAATATCTTCTTGGAGGAGAACAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAACATTATGGCAAAGGGGAGCGAAGCACTCCGTTGCAGAGACAGCATGCCTCCTTACCTAGAGAGCGAGTTTGTGTTCCGAAGGATGAAAATAAAAATGATGAAAAGCCCGGTGGATCGAATTTTGCTAGTCCTCAAGGGTCTGATGCCACAGGTGCGGTAAACACAAATGCACAAAATGGACCCTCAAAGCCAAACAACAGCACACGTTGCCTCTTGAAAAGTGCTAGCATTAGTGGTTCAAAGAGTTATGAGAAGCCAAGTAAAGAAAAAGACCCAGAGGTACTAACTCTATCCTTGGAAGCGCAATATGGTTCTTCATCCAAATTTGCTCTCGGTGAAATACATTTCTGTAGCTTTTGTGTTGAGTGTATTTGTTTTGCTTTAGGAGGAACCAATCGCAGAGGTCAATGA 1323 0.4286 MLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPQHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPPHSIARIRNEKARRYLSGMRKKQPVPLSQKFPSSDPLALRLLERLLAFDPKDRPTAEEALADPYFRGLSNVDREPSTQPISKLEFEFERRKLTKDDVRDLIYREILEYHPQMLQEYLLGGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCVPKDENKNDEKPGGSNFASPQGSDATGAVNTNAQNGPSKPNNSTRCLLKSASISGSKSYEKPSKEKDPEVLTLSLEAQYGSSSKFALGEIHFCSFCVECICFALGGTNRRGQ 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120855g00029 440 Gene3D Transferase(Phosphotransferase) domain 1 21 249 - -
Stsc120855g00029 440 SUPERFAMILY Protein kinase-like (PK-like) 9 231 IPR011009 -
Stsc120855g00029 440 Pfam Protein kinase domain 8 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120855g00029 440 FunFam Mitogen-activated protein kinase 250 272 - -
Stsc120855g00029 440 MobiDBLite consensus disorder prediction 324 339 - -
Stsc120855g00029 440 Gene3D Phosphorylase Kinase; domain 1 1 272 - -
Stsc120855g00029 440 SMART serkin_6 5 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120855g00029 440 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120855g00029 440 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 276 - -
Stsc120855g00029 440 MobiDBLite consensus disorder prediction 340 374 - -
Stsc120855g00029 440 MobiDBLite consensus disorder prediction 305 374 - -
Stsc120855g00029 440 FunFam Mitogen-activated protein kinase 21 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120855g00029 Stsc-Chr120855 124267 128545 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120855g00029 1 385 MAP Kinase Gene Family AT3G18040 81.282 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc120855g00029 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120855g00029 - - gmx:100780831 698.353