Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc120855g00007 | ATGGGTAAGAAGAAGAAGAGGGTTTCGTCCAAGGTATGGTGCTATTATTGCGATCGGGAGTTCGACGATGAGAAGATCTTGGTGCAGCATCAGAAGGCGAAGCACTTCAAGTGCCATGTCTGCCACAAGAAGCTCTCCACCGCCGGTGGTATGGCCATCCACGTCCTCCAGGTCCACAAGGAATCCGTCACCAAGGTCCCGAATGCCAAACCTGGTAGAGAGAGTACAGATATTGAAATATATGGAATGCAAGGGATTCCACCCGATGTTTTGGCTGCTCATTATGGAGAAGAAGACGATGATGTTCCATCAAAGGCAGCAAAGGTGGACATACCATCAACACAGCTTGTAGGTGGAATGGTGCCACCTCCTTTGGGTACAGCATACCCTCCTCGACCAGCGATACCACCCATGTATAATCCAGCCGTGCCTGTCCCCCCAAATGCTTGGGCTGTTCCACCTCGACCTGCTCAGCCATGGTATCCCCAACCTCCCGCTGTTTCAGTTCCGCCTCCTGCCCCTTACACACAACAGCCGTTATTCCCGGTGCAGAACGTGAGACCGCCATTGCCCTCAACTGCTCCTCCTCCTCCACTCCAAACTCAGTGCTCCATCCATAAATCCAGTCCTATCCTCAAGTGCCCCTGTTGA | 651 | 0.5269 | MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEDDDVPSKAAKVDIPSTQLVGGMVPPPLGTAYPPRPAIPPMYNPAVPVPPNAWAVPPRPAQPWYPQPPAVSVPPPAPYTQQPLFPVQNVRPPLPSTAPPPPLQTQCSIHKSSPILKCPC | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc120855g00007 | 216 | MobiDBLite | consensus disorder prediction | 171 | 204 | - | - | |
Stsc120855g00007 | 216 | MobiDBLite | consensus disorder prediction | 171 | 198 | - | - | |
Stsc120855g00007 | 216 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 38 | 59 | IPR013087 | - | |
Stsc120855g00007 | 216 | PANTHER | ZINC FINGER PROTEIN 207 | 1 | 205 | - | - | |
Stsc120855g00007 | 216 | SMART | c2h2final6 | 12 | 35 | IPR013087 | - | |
Stsc120855g00007 | 216 | SMART | c2h2final6 | 36 | 59 | IPR013087 | - | |
Stsc120855g00007 | 216 | Gene3D | Classic Zinc Finger | 1 | 66 | - | - | |
Stsc120855g00007 | 216 | CDD | SUF4-like | 13 | 92 | - | - | |
Stsc120855g00007 | 216 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 14 | 35 | IPR013087 | - | |
Stsc120855g00007 | 216 | ProSiteProfiles | Zinc finger BED-type profile. | 7 | 66 | IPR003656 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc120855g00007 | Stsc-Chr120855 | 38625 | 40148 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc120855g00007 | 1 | 195 | C2H2 Transcription Factor Family | AT1G30970 | 69.756 | 7.53e-87 | 260 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Stsc120855g00007 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc120855g00007 | - | - | gmx:100819009 | 322.013 |