Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120854g00005 ATGGCGTCGTTGCTCACTGAAATTCAGAGATGTCTGAGGCAAGCACGTGTTTGGAGATATGTTGGTCTGGCTTCAACTACAGTTGGACTATCATGTTATGCTCTCAGCTCCTCCTTTAACCATCTGTTCGGAAGGTGGAACTTTCTGAAAATCTTTATCTATATTCTTTCGAGCGTCATCATTTGTTTCATGATTTTATTTGCAAAGGCATGGCAATTCTCCGCGGCTTTTCGATTTAAAGCTCACCTGTCTTTTCTGGCTTTGACAATAACTGCTGTGTACTCGTTTTTCCTGGATAAAAATGTGAACGGAAAACCCGATGTTTACAGCCTAATTTCTTGTGCTGCCTTTGCTGTTATGTGTCTTTGCTTGTCGAGGCAGAGCCACTTTGGATTTGAAGTAGATTTATTGTATTTCTTCTTGGGAGCTTTGATAGTACAACTCATGAAGATACATCTGATTTTAGGTATCTTTGGAGTGGGATTCAGCTACTCCCTCGTCATTCTCCGTCCTGCTTTAGATTTCGAAAACGAGCATCAGAGATTGGACGATCAGTATTACTCAGTTGTGCAAGTTGACTCAGATTCACAACAACAAGGAGCTGCTCAAGTGGATTCCGATTCGCAACAAGTAAGCACTGATATTGTTCTTATCAAGTCACAATTTACTGCTTGTATAAAGGCTCTTAAGTCTTGTGATAGGGAGCTAATTAACATGCTTTTCAAATATGCAAAAGATTACACCAAAACCCTTCTTGAATCCAACTATGAGGACCCTGTACCGGTTGACAGCAATATGGTGATTGACGCACTTCCGTTGAACCTTATCACTGACCTCCAAGAAGCAGTGAAGTTGATGCTCAATAATGGATTTCAGAAGGAGTGTTACGATTCGTACATCAGTTGCCGCAGGGAATATTTACAAGCGTTCGTGTCCAAGTTAATGTTGAAACCGCTTGGGAATTTTGTACATGTGCCATCATTTCATTTTAAATCTGTATTTCGGCAATGGATTACCACTTCCAATTTACATATGTGGTTTCTATTTCCCAATGAAAGAAGACTATCCGAACAAATCTTCTTGGGGTTCAGCACGGTTGCACAAACCATATTCACTGAAATTTGCAGGGAGTTCATTATGGACCAATTATATTTCGCAGATTGCTTTACATTTGAGAGCTCTCACTTCAATACATTTGATTATTTTCCCATGAGCGTAAAAGTATTCAGGGCATTGGATGACTTGATTCCAAAGTATGAATCATTGTTTTGCGAGAAGCCTTGTGATTCAATTAGAAATGAAGCAATCAATACTTGCAAGAGACTGAGGAAAGCAACCAAAGGGATTTTCATAGAGTTGGAAGATTGGATTCGCAATGATAAAGCCATATCAGATGTTCCTGGCGGGCTTTATCCAATCTGCAGCAAAGTGATAGAGTGCCTTAATGGTATTTTCGAAGCTTGGATGACCCTGCCACTTGAGGATTTTTTCGAAGAGCACCCCATGGTTGTTTACAGGAAGGGAAGGCCTTCTACATTCTTTATCCAGCTGGTTAGGATAATAGAGCTTCTAGAGAGGCATTTGGAAGTCAAGTTCAAAAGCTGTTCGGATCATGCTCTTCGCTACGTTACAGCAATGAATAATATAAGGCACATTGAACAAAGTGCACAAAAATGGAATTCGGAAACAGGCTCTATGTATAATAATCGCATAATTAGAATAATTAGAATACTAAATGCAAAAGTCAGACAAAACCTTGAGGACTATCTAACAGTATCATGGGATGAAGTTATTGGGTTTTTGAAGCTGGGCAATAAAGAACCATATTCTGTGGAGTTTATGAAAGAAAATCTAAAATTGTTCAACATGCACTTTAAGGAAATATGCAAGGTTCAGTCTACATGGTTTGTCCTTGATGTGGGGCTAAGAAAAGAGATAAGAGAGTCCATAGATAATATCTTGTTACCAATATATGGAGTCTTTATTGGAAAGTTGTATAATGTTCTTGGATCACATGCCAATGAGTACATTGAGTATTCAATGCTTGACATTGATGCTCTGCTCAATGATTTGTTTCGTGGATAA 2085 0.3899 MASLLTEIQRCLRQARVWRYVGLASTTVGLSCYALSSSFNHLFGRWNFLKIFIYILSSVIICFMILFAKAWQFSAAFRFKAHLSFLALTITAVYSFFLDKNVNGKPDVYSLISCAAFAVMCLCLSRQSHFGFEVDLLYFFLGALIVQLMKIHLILGIFGVGFSYSLVILRPALDFENEHQRLDDQYYSVVQVDSDSQQQGAAQVDSDSQQVSTDIVLIKSQFTACIKALKSCDRELINMLFKYAKDYTKTLLESNYEDPVPVDSNMVIDALPLNLITDLQEAVKLMLNNGFQKECYDSYISCRREYLQAFVSKLMLKPLGNFVHVPSFHFKSVFRQWITTSNLHMWFLFPNERRLSEQIFLGFSTVAQTIFTEICREFIMDQLYFADCFTFESSHFNTFDYFPMSVKVFRALDDLIPKYESLFCEKPCDSIRNEAINTCKRLRKATKGIFIELEDWIRNDKAISDVPGGLYPICSKVIECLNGIFEAWMTLPLEDFFEEHPMVVYRKGRPSTFFIQLVRIIELLERHLEVKFKSCSDHALRYVTAMNNIRHIEQSAQKWNSETGSMYNNRIIRIIRILNAKVRQNLEDYLTVSWDEVIGFLKLGNKEPYSVEFMKENLKLFNMHFKEICKVQSTWFVLDVGLRKEIRESIDNILLPIYGVFIGKLYNVLGSHANEYIEYSMLDIDALLNDLFRG 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120854g00005 694 PANTHER EXOCYST COMPLEX PROTEIN EXO70 213 694 IPR004140 GO:0000145|GO:0006887
Stsc120854g00005 694 Pfam Exo70 exocyst complex subunit 336 690 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc120854g00005 694 SUPERFAMILY Cullin repeat-like 236 692 IPR016159 -
Stsc120854g00005 694 Gene3D Exocyst complex component Exo70 201 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120854g00005 Stsc-Chr120854 31184 33268 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120854g00005 262 694 EXO70 exocyst subunit family AT5G58430 39.775 2.16e-86 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120854g00005 - - aip:107607007 997.653