Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120854g00002 ATGGCGATGTTGCTCACTGAAATTCAGAGATATCTGAGGCAAGCACATGTATGGAGGTTTGTTGGTCTGGCTTCAACTACAGTTGGACTTTCATGTTATGCTCTCAGCTCTTCCTTTAACCATATGTTTGGAAGGTGGAACTTTCTGAAAATCGTTATCTATATTGTTTCCAGTATCATCATTTGTTTCATGATTTTATTTGCAAAGGCATGGCAATTCTCAACCGCTTTGCGATTCAAAGCTCACCTGTCTTTTCTGGCTTTGACAATAACCACAGTCTACTCGTTTTTCTTCGATAAAAATGTCAATGGAAAACCGGATGTTTACAGCCTTATTTCTTGTGCTGCATTCTCTGTGATGTCGCTCAGTTTGTCGAAGCAGAGCCACTTTGGATTTGAAGTGGATCTATTGTATTTCTTCTTGGGAGCTTTAACAGTACAACTCATGAAGATACATTTGTTTTTAGGTATCTTTGGAGTGGGATTCAGCTACTTCCTCATCATTCTCCGCTCCTCTTTAGATTTAGAAAATGGGCATCATAGATTGGATGATCAGTATCACTCAGTTGTGCAAGTTGACTCTGATACACAAGAACAAGCTGCGCAAGTTGATTCCCATTCGGAACAACAAGAAGCTGCCCAAGTGGATTCCGATTTGCAACAAGTCAGCACTGATATTGTCCTTATCAAGTCACAATTTACCGCTTGTATAGAGGCTCTGAAGTCATGTGATAGGGAGCTAATTAATGTGCTTTCCATTTATGCAAAAGATTACATCAAGACTCTCCTCCTTGAATCCAACTATGCCCCGGTTGACAGCAACCTGGTGATTGATGCGCTGCCGTCGACCATTATCAATGACCTTAAAGAAGCAGCGAAGTTCATGCTGGCTAATGGATTTGAGAAGGAGTGTTGCGATTTGTATAGCACTTGCCGCAGGGAATACATAGAAAAGGTCTTGTCCAATTTACGGTTGAACCTGCCAAATTTTGTGAATTTTGTTGAGGTGCAGTCAATTGCTCTTGAATTTGTGGTTTGGAATTGGATTAACTATTCCAATTTAGCTATGAAGTTGCTTTTTCCCAATGAAAGAAGGCTATGCGAACGAATCTTCTTGGGGTTCATAACCGTTGAAGAAACCATATTCACTGAAATTTGCTCTACAGTACTCAAGGTATTGCATGACTTAATTCGAGAGAATGAATCATCATTGTTTTCCCAGCTATCTGTTGATTCAATCGGATACGGAGCGATCAACCCTTCGAAGAGACTAGGGAAAGAAACCAAAGGGATTTTCATAGAGTTGGAGGATTTGATTTGCAATGATAAATCCACGTCAGATGTTCCTGGGGGGCTTTATCCAATCTGCATCAAAACCATAGAGTGCTTTGATGCTTGGATGAAGCTTCTCTTTCAGAATCTTTTCTCAGTGCATCCCACGGTTGTTTTAAGAAGAGGAACCCCTCCTTCATTCTATATGGATTTGTCTAGGATAATAGAGCTTATAGAGAGGTATTTGGATGTCAAGTTGAAAAGCTGTCCGGACCGTGCTCTGCGCTGCATTGTAGCGATGAATAATGTAAGCCACATTGAATTCCATGCAAAGATTTGGGAGTGGGAAACAAGCCCGTTGTGTGATAATGGCATAATTGGAAAACTGAATGCAAAGGTTAGACAAAACCTTGAAGACTATCTAAGAATCTCATGGGATAAGGTAATCGGGCTTTTGAAGCTCGGCGGTACTGAACCATATCTAGTGGAGTCTATGAAAGAAAATCTCAAATTGTTCAATGATAAGTTTAAGGAAATATGCAGGGTTCAGTCTACATGGTTTGTCCTTGATGAGTGGTTAAGAAAAGAAATAATAAAGTCTATAGATAATATCTTGTTGTCGACATATGGATTCTTTATCGGAGAGTTGTTTAACATTCTTGGTCCACATGCTAATGAGTATATTGAGTACTCAATGCTCGACATTGATGCTCTGCTCAATGATTTGTTTCGTGGATAA 2010 0.399 MAMLLTEIQRYLRQAHVWRFVGLASTTVGLSCYALSSSFNHMFGRWNFLKIVIYIVSSIIICFMILFAKAWQFSTALRFKAHLSFLALTITTVYSFFFDKNVNGKPDVYSLISCAAFSVMSLSLSKQSHFGFEVDLLYFFLGALTVQLMKIHLFLGIFGVGFSYFLIILRSSLDLENGHHRLDDQYHSVVQVDSDTQEQAAQVDSHSEQQEAAQVDSDLQQVSTDIVLIKSQFTACIEALKSCDRELINVLSIYAKDYIKTLLLESNYAPVDSNLVIDALPSTIINDLKEAAKFMLANGFEKECCDLYSTCRREYIEKVLSNLRLNLPNFVNFVEVQSIALEFVVWNWINYSNLAMKLLFPNERRLCERIFLGFITVEETIFTEICSTVLKVLHDLIRENESSLFSQLSVDSIGYGAINPSKRLGKETKGIFIELEDLICNDKSTSDVPGGLYPICIKTIECFDAWMKLLFQNLFSVHPTVVLRRGTPPSFYMDLSRIIELIERYLDVKLKSCPDRALRCIVAMNNVSHIEFHAKIWEWETSPLCDNGIIGKLNAKVRQNLEDYLRISWDKVIGLLKLGGTEPYLVESMKENLKLFNDKFKEICRVQSTWFVLDEWLRKEIIKSIDNILLSTYGFFIGELFNILGPHANEYIEYSMLDIDALLNDLFRG 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120854g00002 669 PANTHER EXOCYST COMPLEX PROTEIN EXO70 211 669 IPR004140 GO:0000145|GO:0006887
Stsc120854g00002 669 Gene3D Exocyst complex component Exo70 185 669 - -
Stsc120854g00002 669 SUPERFAMILY Cullin repeat-like 257 667 IPR016159 -
Stsc120854g00002 669 Pfam Exo70 exocyst complex subunit 347 404 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc120854g00002 669 Pfam Exo70 exocyst complex subunit 422 665 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120854g00002 Stsc-Chr120854 14234 16312 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120854g00002 271 669 EXO70 exocyst subunit family AT5G58430 36.866 1.53e-70 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120854g00002 - - aip:107607007 942.569