Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120854g00001 ATGGAATCTTTGGCCAGATTCTCAAAACCTCCACTTCACAGGAAACTTCCTTTCAGACGACCAGAACTTAACATGGCATTTCTGCTTTCCGATTTTCACTTCTGTTTCTACTCCTTCTCTTGCTCTTACCCTTCCATTTTGGACGAAGCTTCCTTCATAAATTCCACGAAGCATCCCAGCGTGGAATGCAAAAAGAATCAAGAACAGGGAAAAGCAAATCTGAACATCATCCTTAGCTTCCTAATACTGTTTGCAAAGAAATGGTCACATTCAAGGACTCTCCGATTTAAAGCTCATATGGCATGCTTGGTTTTAACTGTCACCTCTGTCTACTCGTTTTACTTCGACAAAGCTTCAAAGGGAAAACCGGATGCATATAGTCTGATTTCCTGTGCTGCATTTGCTGTTATGTCACTAAGCTTGTCGAGGCAGATCCAATGCGGATTCGAAGTGGACCTGTTGTATTTCTTCTTGGGAGCTCTGATCATACAACTCATGAAGATAAGTTTGTTGCTAGGTTGCATTGGAGTGATATTCAGCTATGCTCTCATCATTCTTCGTTCCTCGTTAGATGCATCATCATCATCAGGTGTGTATCTTACAATCCAAGATCAGCATCACCTTGTTGTGCAAGTAGATTCGGGTCCGAGTTCACAGCAAGCCAATTCTACAATTGATGACTTCATGCCACAACTCACTGCTTGTCTGGAAGCTATTCAGGGAAACAACTGGAGGATGATTGCTATGCTTGAAAGGTATGCAACGAAATATATAAGAGCTGCTGAAGTTCAAAACTATGACCTTCCCATTCCAGTTGACTGCAACTTGTTGATTGATTTGTTGCCGTTGGATTCTATTAACAACCTTCATGAGGCCGTGGAGCTCATGGCAGCTGCTGGATTTGAGAAAGAGTCTTGTCATGCATACAGCAATTGCAGGAGGGAGTTTCTAAAACAATGGCTATCCTATCTGATGTTGCGATTGCCAGCAATCGAGGCTGTGATAGGGATGGAGTCATCTTATCTCGAACGCGAGATTAACATTTGGATTAAAGTCTCCAATCTAGCATTGAGGCTTATGTTTCCCAATGAAAGGAGCCTATGCGAACGTGTCTTTTCGGGTTTCACCTCAACTGTGGATCATGCTTTTGGTGAAGTTTGTAGGGAATTCGTTATTAGCCATCTGGATTTCTGCAATGGCTTTGTAGCCCAGAGCATTGTATCCAAAACGCTCATGTTTTTCCCCAGAGTTTCAAAGCTGTTCAAGACTGTTCATGACTTGATTCCGGAGTACCAATCACTATTTTCTGATCCATCCAGTGACGCAATCAGAAATCAAGCAATCCACACATGGAAGAAACTAGGCCAAGCAGTGACAGATATTTTCAAGGACTTGGAGGATAGGATTTACCGCGATCGTGATAGTGATGTGGTTCGGTTTCTTCGTGGACTGTATCCAATCTCCTGTGATGTGATGGATTGCCTCAGCAGCGTTTGTGAATCTTGGAATGTTCTTGGATTGGAGAAAGTTTTCAAAGAGCATCCCATGTTTGCGGATACAGAGGGAACCTCTTTTTCATTTTCTGACCAGTTCACAAGGATAGTGGAGCTGCTGGTTAGCCAGTTGGAAGTTGAGTCCAAAAACCACACCAACTCTATTGAGGGATGTGTCTTCCTCATAAACAATTTTAGGTACATAGAGAACAAGTTAATCGAGTGTCAATCGAGAATGAGCACTGTTATTCTCCAAGATGGCACAATAAGAAAACTCAATGCAATGGTCAAGCAAAACCTTGAAGAGTATCAAAGAAGCTCGTGGGACAAGATTTTCAGGATTTTGGAGCAAGGCAGCAATAATGAACATGAAGAAGAAGCAATAATCATGGGGTTAATGAAGAAGAACATCAAATTGTTTAACATGTACTTCAGGGAACTATGCAGGGTTCAATGTAGATTCGTAATTTCTGATGAGCAACTAAGAAAAGAAATGCAACAGTCCGTAGAGGAAATCTTGTTTCCAAGTTATGGAGCCTTCATTGGCAAATTCAAGAACATTCTTGGCTCGCATGCTAATGAGTTTATTGAGTATTCAATGCATGACATTGATGTTCAACTCAATGAATTGTTTCTTGGAGTCAGTTGGGAACTTGATGTTCTGTAG 2160 0.4162 MESLARFSKPPLHRKLPFRRPELNMAFLLSDFHFCFYSFSCSYPSILDEASFINSTKHPSVECKKNQEQGKANLNIILSFLILFAKKWSHSRTLRFKAHMACLVLTVTSVYSFYFDKASKGKPDAYSLISCAAFAVMSLSLSRQIQCGFEVDLLYFFLGALIIQLMKISLLLGCIGVIFSYALIILRSSLDASSSSGVYLTIQDQHHLVVQVDSGPSSQQANSTIDDFMPQLTACLEAIQGNNWRMIAMLERYATKYIRAAEVQNYDLPIPVDCNLLIDLLPLDSINNLHEAVELMAAAGFEKESCHAYSNCRREFLKQWLSYLMLRLPAIEAVIGMESSYLEREINIWIKVSNLALRLMFPNERSLCERVFSGFTSTVDHAFGEVCREFVISHLDFCNGFVAQSIVSKTLMFFPRVSKLFKTVHDLIPEYQSLFSDPSSDAIRNQAIHTWKKLGQAVTDIFKDLEDRIYRDRDSDVVRFLRGLYPISCDVMDCLSSVCESWNVLGLEKVFKEHPMFADTEGTSFSFSDQFTRIVELLVSQLEVESKNHTNSIEGCVFLINNFRYIENKLIECQSRMSTVILQDGTIRKLNAMVKQNLEEYQRSSWDKIFRILEQGSNNEHEEEAIIMGLMKKNIKLFNMYFRELCRVQCRFVISDEQLRKEMQQSVEEILFPSYGAFIGKFKNILGSHANEFIEYSMHDIDVQLNELFLGVSWELDVL 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120854g00001 719 PANTHER EXOCYST COMPLEX PROTEIN EXO70 241 710 IPR004140 GO:0000145|GO:0006887
Stsc120854g00001 719 Pfam Exo70 exocyst complex subunit 349 707 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc120854g00001 719 Gene3D Exocyst complex component Exo70 208 715 - -
Stsc120854g00001 719 SUPERFAMILY Cullin repeat-like 229 709 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120854g00001 Stsc-Chr120854 10292 12729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120854g00001 267 713 EXO70 exocyst subunit family AT5G58430 41.189 3.64e-97 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120854g00001 - - aip:107607007 561.992