Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120852g00025 ATGGCTAGAGAAGTTATTGCCACTCCACCTGGTGCTTCAGATGACTATGATATGTTGGAAGGTGATTCCGACATCACCGGAACTGTTTCCAGGCGCCTAAGTCCATGGATTGAACCTGAAAGATTAAAACTCAGACACAGAATTGGTCGGGGACCTTTCGGGGATCTATGGCTAGCAACTCATCATCATTCCACTGAAGATTATGACGAGTACCATGAAGTTGCTGCTAAGATGTTATATCCAATCAGAGAGGATAATACAAAGATTATATTAGAGAAGTTCAATCAATTATATTCTAAGTGCCAAGGAGTTGCTGGTGTTTGCTGGCTACATGGAATTTCAATCATAAATGGAAGGATATGCATCATTATGAACTTGTATGAGGGTTCGGTTGGTGACAAGATGGCTAGACTTAGAGAAGGACGGATTTCGTTGCAAGATGTTTTAAGGTATGGGATCAATCTGGCTCAAGGTGTTTTGGAACTTCATTCTAAAGGGATCCTTATTCTCAACATTAAACCATTCAACATTCTTCTCGATGACAATGATCAAGCAATTTTGGGAGATGTTGGCATTCCCAACCTCTTGCTTGGCTCCTCGTATCTAAGCTCAGATATGGCTCAGAGGCTTGGAACTGCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGATCAGAGGCCCTATATCCTTCGAAACAGACTCGTGGGGATTCGGCTGCACCATTGTTGAAATGTTGACTGGTAATCAACCTTGGTATGGATACCCTGTTAGTGGAGTTCACAACTCAGTTGTTGAAAAGCATGAAAAGCCCCTTATTCCAAGCGGCCTTCCTTCTTCAGTTGAGAATCTCCTCAATGGATGCTTCGAGTATGATTTGAGGAATCGCCCACTGATGAAAGATATTCTTCGTGTCTTCAAAAGCACACTTGATGAACTGGCAAATGATGGAGCATGGAGATATCTTGGAAATGTGAAAGCTAATGCAAAATCAAGTAGCACTGGCTACACAGAGTGGTTTCTCTCAAAGGATCCTCTTCAAGTGCGTGATACGGTGCGATCCAGGAAGCCTTCCAATTCATGCACACCTCAAAATATGGATGTCCCCGGTGGAACTGTTGTTGGTCTAGAACGTAATCCAGATAATGGTTTTGTTCTTGTGAGGGTCCATGGAATTCACGACCCAATAAGAGTTCATGTGTCAAGTCTTGAACGTGTCACATTTGGCCTGGCGGCTGGTGATTGGGTTCGATTGAAGGATGAAAATGAGAAACACTCACCAGTAGGAATTTTACATTACATTGAGCGTGAAGGTAGAGTTACTGTGGGATTTATCGGTCTGCCAACCCTTTGGAAGGGAAATTCTTCTCAACTCGAAATGGCTAAATCCTACTGTGTTGGCCAGTTTGTTAGGCTGAAAGAGAATGTCTTGAGTCCTCGATTTGAATGGCGTAAACGAGGAGGGGCCTGGGCTACCGGCAAGATTTCATGGATCCTACCAAATGGGTGTTTGGTTGTCAAGTTCCCTGGGCTGCTGCCTTTTGGTAACGAATCGAGAACCTTCTTGGCCGATCCTTCTGAGGTTGAAATGGTTGATTTCAAGACTTGTCCTGGGATGATAGAGAAGTATCAACATGTTGAGGATCATCATTGGGCAGTTAGACCTGTTTTAATAGCATTCGGAATATTCACAGCTTGGAAATTCGGAATGTTTGTGGGGAAGAAGGTAGGGAGGAGCATGAAGAAAGTTAATGCAATAGACGGTGAAGTTGATGGTCAAAATGGTAACAATACTACACGGAGATCTACCACTGCTATTATGAATCCTGGCAACACAACTTGGGTTCCTTCAGTCGCCAACATCCTCTTCAAAGAAGGAGGTTCCACCCCCACTGCCCGGTAG 1902 0.439 MAREVIATPPGASDDYDMLEGDSDITGTVSRRLSPWIEPERLKLRHRIGRGPFGDLWLATHHHSTEDYDEYHEVAAKMLYPIREDNTKIILEKFNQLYSKCQGVAGVCWLHGISIINGRICIIMNLYEGSVGDKMARLREGRISLQDVLRYGINLAQGVLELHSKGILILNIKPFNILLDDNDQAILGDVGIPNLLLGSSYLSSDMAQRLGTANYMAPEQWEPEIRGPISFETDSWGFGCTIVEMLTGNQPWYGYPVSGVHNSVVEKHEKPLIPSGLPSSVENLLNGCFEYDLRNRPLMKDILRVFKSTLDELANDGAWRYLGNVKANAKSSSTGYTEWFLSKDPLQVRDTVRSRKPSNSCTPQNMDVPGGTVVGLERNPDNGFVLVRVHGIHDPIRVHVSSLERVTFGLAAGDWVRLKDENEKHSPVGILHYIEREGRVTVGFIGLPTLWKGNSSQLEMAKSYCVGQFVRLKENVLSPRFEWRKRGGAWATGKISWILPNGCLVVKFPGLLPFGNESRTFLADPSEVEMVDFKTCPGMIEKYQHVEDHHWAVRPVLIAFGIFTAWKFGMFVGKKVGRSMKKVNAIDGEVDGQNGNNTTRRSTTAIMNPGNTTWVPSVANILFKEGGSTPTAR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120852g00025 633 Pfam Protein tyrosine and serine/threonine kinase 42 304 IPR001245 GO:0004672|GO:0006468
Stsc120852g00025 633 MobiDBLite consensus disorder prediction 1 20 - -
Stsc120852g00025 633 PANTHER OS06G0639500 PROTEIN 1 629 - -
Stsc120852g00025 633 ProSiteProfiles Protein kinase domain profile. 42 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120852g00025 633 Gene3D Transferase(Phosphotransferase) domain 1 35 312 - -
Stsc120852g00025 633 SUPERFAMILY Protein kinase-like (PK-like) 40 306 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120852g00025 Stsc-Chr120852 194800 199764 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120852g00025 37 313 MAP Kinase Kinase Kinase AT2G17700 25.714 2.15e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Stsc120852g00025 PK_Tyr_Ser-Thr 4.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120852g00025 - - gsj:114393396 976.467