Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120852g00024 ATGGAAGATTCAGGAATGGCTAGAGAAGTTATTGCCACTCCACCTGGTGCTTCAGATGACTATGATATGTTGGAAGGTGATTCCGACATCACCGGAACTGTTTCCAGGCGCCTAAGTCCATGGATTGAACCTGAAAGATTAAAACTCAGACACAGAATTGGTCGGGGACCTTTCGGGGATCTATGGCTAGCAACTCATCATCATTCCACTGAAGATTATGACGAGTACCATGAAGTTGCTGCTAAGATGTTATATCCAATCAGAGAGGATAATACAAAGATTATATTAGAGAAGTTCAATCAATTATATTCTAAGTGCCAAGGAGTTGCTGGTGTTTGCTGGCTACATGGAATTTCAATCATAAATGGAAGGATATGCATCATTATGAACTTGTATGAGGGTTCGGTTGGTGACAAGATGGCTAGACTTAGAGAAGGACGGATTTCGTTGCAAGATGTTTTAAGGTATGGGATCAATCTGGCTCAAGGTGTTTTGGAACTTCATTCTAAAGGGATCCTTATTCTCAACATTAAACCATTCAACATTCTTCTCGATGACAATGATCAAGCAATTTTGGGAGATGTTGGCATTCCCAACCTCTTGCTTGGCTCCTCGTATCTAAGCTCAGATATGGCTCAGAGGCTTGGAACTGCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGATCAGAGGCCCTATATCCTTCGAAACAGACTCGTGGGGATTCGGCTGCACCATTGTTGAAATGTTGACTGGTAATCAACCTTGGTATGGATACCCTGTTAGTGGAGTTCACAACTCAGTTGTTGAAAAGCATGAAAAGCCCCTTATTCCAAGCGGCCTTCCTTCTTCAGTTGAGAATCTCCTCAATGGATGCTTCGAGTATGATTTGAGGAATCGCCCACTGATGAAAGATATTCTTCGTGTCTTCAAAAGCACACTTGATGAACTGGCAAATGATGGAGCATGGAGATATCTTGGAAATGTGAAAGCTAATGCAAAATCAAGTAGCACTGGCTACACAGAGTGGTTTCTCTCAAAGGATCCTCTTCAAGTGCGTGATACGGTGCGATCCAGGAAGCCTTCCAATTCATGCACACCTCAAAATATGGATGTCCCCGGTGGAACTGTTGTTGGTCTAGAACGTAATCCAGATAATGGTTTTGTTCTTGTGAGGGTCCATGGAATTCACGACCCAATAAGAGTTCATGTGTCAAGTCTTGAACGTGTCACATTTGGCCTGGCGGCTGGTGATTGGGTTCGATTGAAGGATGAAAATGAGAAACACTCACCAGTAGGAATTTTACATTACATTGAGCGTGAAGGTAGAGTTACTGTGGGATTTATCGGTCTGTTGACCCTTTGGAAGGGAAATTCTTCGCAACTCAAAATGGCTAAATCATACTGTGTTGGTCTGTTTGTTAGGCTGAAAGAGAATGTATTGAGTCACCGATTTGAATGGCGCAAACGGGGAGGGGCTTGGGCTACCAGCAAGATTTCATGGATCCTACCGAATGGGTGTCTGGTCATCGAGTTCCGAGGGCTGCTGCCTTTTGGTAACGAATTGTGA 1572 0.4364 MEDSGMAREVIATPPGASDDYDMLEGDSDITGTVSRRLSPWIEPERLKLRHRIGRGPFGDLWLATHHHSTEDYDEYHEVAAKMLYPIREDNTKIILEKFNQLYSKCQGVAGVCWLHGISIINGRICIIMNLYEGSVGDKMARLREGRISLQDVLRYGINLAQGVLELHSKGILILNIKPFNILLDDNDQAILGDVGIPNLLLGSSYLSSDMAQRLGTANYMAPEQWEPEIRGPISFETDSWGFGCTIVEMLTGNQPWYGYPVSGVHNSVVEKHEKPLIPSGLPSSVENLLNGCFEYDLRNRPLMKDILRVFKSTLDELANDGAWRYLGNVKANAKSSSTGYTEWFLSKDPLQVRDTVRSRKPSNSCTPQNMDVPGGTVVGLERNPDNGFVLVRVHGIHDPIRVHVSSLERVTFGLAAGDWVRLKDENEKHSPVGILHYIEREGRVTVGFIGLLTLWKGNSSQLKMAKSYCVGLFVRLKENVLSHRFEWRKRGGAWATSKISWILPNGCLVIEFRGLLPFGNEL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120852g00024 523 Pfam Protein tyrosine and serine/threonine kinase 47 309 IPR001245 GO:0004672|GO:0006468
Stsc120852g00024 523 ProSiteProfiles Protein kinase domain profile. 47 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120852g00024 523 SUPERFAMILY Protein kinase-like (PK-like) 45 311 IPR011009 -
Stsc120852g00024 523 Gene3D Transferase(Phosphotransferase) domain 1 40 317 - -
Stsc120852g00024 523 PANTHER OS06G0639500 PROTEIN 6 522 - -
Stsc120852g00024 523 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120852g00024 Stsc-Chr120852 185978 199716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120852g00024 42 318 MAP Kinase Kinase Kinase AT2G17700 25.714 1.21e-21 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Stsc120852g00024 PK_Tyr_Ser-Thr 2.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120852g00024 - - gsj:114393396 830.861