Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120852g00019 ATGTTTTCCAAACACAATGCTCCAAAAGCAGAAGATCCAAGACTCAAGGCCATCACAGAAGCCATCAGAGTGGTTCCTCACTTCCCCAAACAAGGGATAATGTTTCAGGACATAACGACATTGTTGTTGGATCATAAGGTTTTTAAGGACACAATTGACATTTTTGTTGATCGTTATAAAGACATGGGAATTTCCATTGTTGCTGGAGTTGAAGCCAGGGGATTCTTTTTTGGCCCCTCAATTGCATTAGCCATTGGTTCAAAGTTTGTTCCTTTGCGCAAACCTCGAAAGCTACCAGGGCGGAACATAACTGGTGCTTGGTATTTAGGTGAAGTAATATCAGAAAAATATGTTCTAGAATATGGAAGTGATTGCTTGGAGATGCATGTTGGTGCTGTGAAACCTGGTGACAAAGCCATTGTTATTGATGATCTGGTGGCTACAGGTGGAACTCTCTCTGCAGCAATTAGCCTCCTAGAACGTGGTGGTGCTGAAGTAGTGGAATGTGCTTGTGTCATTGGTCTCTCTCATTTTAAGGATGATTGCAGTGTGAATGGGAAACCACTTTATTTTCTTGTGGAACCGCGACTACAATAG 597 0.4221 MFSKHNAPKAEDPRLKAITEAIRVVPHFPKQGIMFQDITTLLLDHKVFKDTIDIFVDRYKDMGISIVAGVEARGFFFGPSIALAIGSKFVPLRKPRKLPGRNITGAWYLGEVISEKYVLEYGSDCLEMHVGAVKPGDKAIVIDDLVATGGTLSAAISLLERGGAEVVECACVIGLSHFKDDCSVNGKPLYFLVEPRLQ 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120852g00019 198 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 196 - -
Stsc120852g00019 198 FunFam Adenine phosphoribosyltransferase 1 6 195 - -
Stsc120852g00019 198 SUPERFAMILY PRTase-like 22 175 IPR029057 -
Stsc120852g00019 198 Hamap Adenine phosphoribosyltransferase [apt]. 18 195 IPR005764 GO:0003999|GO:0005737|GO:0006168
Stsc120852g00019 198 CDD PRTases_typeI 52 194 IPR000836 -
Stsc120852g00019 198 Gene3D - 6 194 IPR029057 -
Stsc120852g00019 198 Pfam Phosphoribosyl transferase domain 59 173 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120852g00019 Stsc-Chr120852 167155 169933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120852g00019 11 194 PRT Gene Family AT1G27450 64.674 1.62e-82 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120852g00019 K00759 - mof:131158221 303.138