Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120850g00014 ATGGAGATTCTTCAAATAGCTTACTTCCTTTTCTTTCTTGCAACTCTCACTTGGCTCTTATCCACAAGACTCTCTTCATCTTCAACATCCAAAAAAGCTCCACCAAACCCCAATGCTCCTAAAGCCTACCCTATAATTGGCTCCATCTTCGCCATCGCCGCCAACAAACACCGCCGCATCCACTGGATCTCCGACATCCTCCTCTCCCCCCCCTCCTCCTCCACCTTCACCCTCCGCCGCTCCCTAGGCTCCCGCCAGATCTTCACCGCCGACCCCGCCGTCGTCCACCACATCCTCAAGTCCAATTTCCCAACTTACCACAAAGGTCCCACCCTCCACCGCGCCCTCGGAGACTTCCTCGGCGACGGAATCTTCAACTCCGACGGCAGCAACTGGAAGTTCCAGCGCCAGCTCTCCAGCCACGAGTTCAACACAAGATCCCTCCGAAACTTCGTTGAAACTGTTGTAGACGCTGAACTCTCCAACCGCCTCATCCCAATCCTTTCACAGAGATGTGAAACCGCCATAACCGCCACATCTTCTTGCGACTTACAAGATATTCTCCAGCGCTTCGCCTTCGATAACATTTGCAAGATCGCTTTTGGTTACGATCCGCAATATCTCCTCCCATCACTTCCAACAACCACCTTCGCCAAGGCCTTCGACGATGCCACTAGAATCAGCAGCGAAAGGTTCAATTCCGCGGTGCCGCTGGTATGGAAGATAAAGAAAATCCTAAACATAGGCTCCGAAAAGAGGCTCAGAACTGCAGTGTCGGAGGTGAGAGGTTTAGCGAAGAAGATCGTAGATGAGAAGAAGCGAGAGCTTGAAGAGAAGAAAACGCTGCAATCCGTGGATCTATTGTCGCGGTTCTTGGTTTCTGGACAAAACGACGAGTCGTTTGTAACTGATATAGTCATCAGCTTTATTCTAGCGGGGAGGGACACTACTTCTGCAGCACTCACGTGGTTCTTTTGGCTACTCGCTGATCACCCCCACGTGGAGGAGGAGGTGGTTGGCGAAGTTAACCAGAAGAACCACGAGAATGGTTCTTCAGTTTACGATGAATTAAAGGATATGGTGTATACTCACGCTGCGTTGTGCGAGAGCATGAGATTATACCCTCCTGTGCCTGTGGATACGAAAGAGGCTGCGAACGACGACGTTTTGCCAGACGGTACTTTTGTGAAGAAAGGAAACCGTGTAGCGTACCATATCTTTGCGATGGGGAGGAGTGAGAAGATATGGGGCCCGGATTGGGCCGAGTTCAGGCCCGAAAGGTGGTTGAAGCGGGATGGAGAGGGGAAGTGGGCTTTTGTTGGAGTTGATCCGTACAGTTATACGGTGTTTCAGGCTGGGCCAAGGGTGTGTTTAGGGAAGGAGATGGCGTTTTTGCAGATGAAGAGAATTGTGGCGGGGATTTTGAAGGAATTTAGGGTGGTTCCGGCGGTGGCGGAAGGGGTGGTGCCGGAGTATACTGGGTATCTTACGTCGCTAATGAAAGGTGGGTTCCCAGTGAAGATAGAGAAGCGAAGATAA 1539 0.514 MEILQIAYFLFFLATLTWLLSTRLSSSSTSKKAPPNPNAPKAYPIIGSIFAIAANKHRRIHWISDILLSPPSSSTFTLRRSLGSRQIFTADPAVVHHILKSNFPTYHKGPTLHRALGDFLGDGIFNSDGSNWKFQRQLSSHEFNTRSLRNFVETVVDAELSNRLIPILSQRCETAITATSSCDLQDILQRFAFDNICKIAFGYDPQYLLPSLPTTTFAKAFDDATRISSERFNSAVPLVWKIKKILNIGSEKRLRTAVSEVRGLAKKIVDEKKRELEEKKTLQSVDLLSRFLVSGQNDESFVTDIVISFILAGRDTTSAALTWFFWLLADHPHVEEEVVGEVNQKNHENGSSVYDELKDMVYTHAALCESMRLYPPVPVDTKEAANDDVLPDGTFVKKGNRVAYHIFAMGRSEKIWGPDWAEFRPERWLKRDGEGKWAFVGVDPYSYTVFQAGPRVCLGKEMAFLQMKRIVAGILKEFRVVPAVAEGVVPEYTGYLTSLMKGGFPVKIEKRR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120850g00014 512 Gene3D Cytochrome P450 22 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 CDD CYP86A 75 504 - -
Stsc120850g00014 512 Pfam Cytochrome P450 39 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00014 512 PANTHER CYTOCHROME P450 24 506 - -
Stsc120850g00014 512 SUPERFAMILY Cytochrome P450 34 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120850g00014 Stsc-Chr120850 111800 113338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120850g00014 1 511 Cytochrome P450 AT3G48520 46.498 3.82e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120850g00014 K20769 K20768 gmx:100781020 657.907