Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120850g00002 ATGGAGCTTATTCATCCCATAGCTTACTTCCTTCTCTTTCTTGCAACCCTCACTTGGCTTTTAGCCACAACACTCTCTTCCTCTTCAACATCCAAAAAAACTCCACCAAACACCAATGCTCCTAAATCATACCATATGATTGGCTACATCTTTGCCTTTGCCGCCAACAAACACCGCCGCATCCAGTGGATCTCTGACATTCTCCTCTCTTCCCCATCCTCCCCCACCTTCACCCTCCGCCGCTTATTCGGCTCCCACCAGGTCTTCACCGCCGACCCAGCCGTCGTCCAACACATCCTCAAGTCCAACTTCCAAAACTACCCCAAAGGTCCCACCCTCCGTCGCGCCCTCGGTGACTTCCTTGGCGACGGCATCTTCAACTCTGACGGCAACCATTGGAAGTTCCAACGCCAGCTCTCCAGCCACGAGTTCAGCACAAAATCCCTCCGCAACTTCATAGAAACCGTAGTTGACAAAGAACTCTCCAACCGCCTCATTCCAATCTTATCCCAACTAAGTCTAGCATCATCTTCACCATGTGACTTAGAAGATATCCTCCAGCGCTTCGCCTTCGATAACATATGCAAGATTGCATTCGGTTACGATCCACAATATCTACTTCCATCGCTTCCAACAACCACTTTCTCCATGGCCTTTGACGACGCTACAAGAATAAGCAGCCAGAGGATCTACTCTGCCGTGCCACTAATCTGGAAGATAAAGAAAATCCTAAACATAGGCTCCGAAAAGAGGCTTCGAATTGCTGTATCGGAGGTGAGAGGAGTAGCACAGAAGATCATAGAGGAGAAGAAGCGAGAGCTTCAAGAGACGAAAGCATTGCAATCCGTGGATCTGTTGTCGCGGTTCTTGGTTACCGGACAAAATGACGACTCGTTTATAAGGGACATAGTCATCAGCTTCATTCTCGCAGGGAGAGACTCGACTTCTATCGTGCTCACGTGGTTCTTTTGGCTACTCGCCAATCACCCGCACGTGGAGAATGAGGTGGTTGAAGAAGTTAACCAAAAGAACCACGCAAATGCTTCGTCTGTTTACGACGAATTAAAGGACATGGTGTATACTCACGCCGCGTTGTGCGAGACCATGAGATTGTACCCTCCTGTGGCGGTGGATATGAAAGAGGCTGTAAACGATGACGTTTTGCCGGACGGTACTTTTGTGAAGAAAGGGACGCATGTCTCATACCATATATTTGCGATGGGAAGGAGTGAGAGGATATGGGGCACGGATTGGGCCGAGTTCAGGCCTGAGAGGTGGTTGAGGCGGGACGGGGAGGGGAAATGGGCTTTTGTTGGAGTTGATCCGTACAATTATCCGGTGTTTCAGGCCGGGCCTAGAGTGTGTTTAGGGAAGGAGATGGCGTTCTTGCAAATGAAGAGAGTCGTGGCAGGGATCTTGAGGGAGTTTAGGGTGGTTCCAGCGATGGCAAAAGGGGTGGTGCCGGAGTATACTGCTCATCTTACGTCGCTCATGAAAGGCGGGTTCCCAGTGAGGATAAAGAGGCGAAGCCAACTACACATGTGA 1545 0.5003 MELIHPIAYFLLFLATLTWLLATTLSSSSTSKKTPPNTNAPKSYHMIGYIFAFAANKHRRIQWISDILLSSPSSPTFTLRRLFGSHQVFTADPAVVQHILKSNFQNYPKGPTLRRALGDFLGDGIFNSDGNHWKFQRQLSSHEFSTKSLRNFIETVVDKELSNRLIPILSQLSLASSSPCDLEDILQRFAFDNICKIAFGYDPQYLLPSLPTTTFSMAFDDATRISSQRIYSAVPLIWKIKKILNIGSEKRLRIAVSEVRGVAQKIIEEKKRELQETKALQSVDLLSRFLVTGQNDDSFIRDIVISFILAGRDSTSIVLTWFFWLLANHPHVENEVVEEVNQKNHANASSVYDELKDMVYTHAALCETMRLYPPVAVDMKEAVNDDVLPDGTFVKKGTHVSYHIFAMGRSERIWGTDWAEFRPERWLRRDGEGKWAFVGVDPYNYPVFQAGPRVCLGKEMAFLQMKRVVAGILREFRVVPAMAKGVVPEYTAHLTSLMKGGFPVRIKRRSQLHM 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120850g00002 514 PANTHER CYTOCHROME P450 25 504 - -
Stsc120850g00002 514 Gene3D Cytochrome P450 23 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 Pfam Cytochrome P450 82 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc120850g00002 514 CDD CYP86A 75 502 - -
Stsc120850g00002 514 SUPERFAMILY Cytochrome P450 41 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120850g00002 Stsc-Chr120850 21633 23177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120850g00002 10 512 Cytochrome P450 AT3G48520 46.548 1.70e-149 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120850g00002 K20769 K20768 gmx:100781020 629.017