Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120850g00001 ATGGAAGAAGTTAAAGTTGAAATCATTTCTAAAGAAGATATTAGACCTTCTTCTCCTACACCTTCTCACCTAAGAATCTTCAAACACTCAAGTTTAGATCAAATTGTTCCCGTTCCTTATGTTGTAATCACCCTATTCTACACGTCACATAATCCCTATGAATTCCAACAGAAATTAGAATTACTTAAACAATCATTATCTGAGACACTAACTCAATTCTACCCTCTTGGTGGCAAGATCAAAGATGATATTTCCATTGATTGCAACGATGAAGGTGCAAACTTTGTAGTAGCAAAAGTGAATTGTTCTCTTGAAAAGTTTCTAAGCAAGCTTGATTTGAATTCACTGGACAAGTTTATTCCAATACCATTCTTCCATGAAGCATCAGAAGGAGATCATGTGACTAACATTCAACTTAGTGTCTTTGATTGCGGTGGAATTGCGATTGGATTTTGCATTTCTCATAGGACCATTGATGGTGAATCTCTTAGCACCTTCGTTAAGGTGTGGACAGAAAGAACCGGCCGCGACCGCAATTCAAAACCCTGGACAGAACCGAACTTTGCTGCACGTTCTCTCTTCCCTACAAGAACTTTACGTTTCAGAGATTTGTCAAAGGAAATTTGGGGGTCCTATTTTAAGGAAGGAAAATGGGCCACAAGGAGGTTTTTGTTCACAAATTCAACTATTGCCACTCTCAAGGCTCGAATATTGGAGGAATCTTCGTCAGATCCATCGAAGAATCTTTGTCCCACACGCGTCCAGATAGTTTCTGCATTGTTGTGGAAGTGTTTCATGGCCGTGACGAAGGCACAATTCGGAGCTCAAAAGCCTTCTGAGTTGAACCATTTTGTTAACCTTCGCCGAAAAATGGAAGAACCCATGAGTCTCAATAACTCTATAGGAAACTTTTTATGGTTGACATCTGCAAAACACATGGCTGAACATGAGTTGGATTTGGCTGGGTTAGTGACTAAATTGAGCAACTCAATTCAAGAAATTGATAAGGATTTTGTGGCAAGATTGCAGAGTGAGGAGGGAAGTTCAATAATGGAAGATTCTCTTGAGAAAATCCGTGAAGCATGGTTAAATAAGGGTGAAGAATTGGAACAATATCTTTTTAGTAGTTGGTGTAACTTTGGACACCATGATGCTGATGATTTTGGGTGGGGAAAACCTATATGGGTTAGTAGTGTTTGTATAACTACTTCAGTGCATTCAAATACAGTCATCTTTGTCGATACTAGGCTTAAAGATGGTATAGAAGCTTGGGTTACCTTGGATGAGAAGAAAATGAAATATTTGGAGTCATGCACTGAATTACTTGCTTATGCAACTGTTGATCCAAGTCCTTTGGCAATGGAGATCCACAAGATAGTAGATCTGGTTGAGAGTGGTGGAACGCGAAGCTTCTTTGAGCAGCTTGGAGATCTGGTTCTTGTTGACAGGTGGTTTAGGTGTGGGGATCCTTTCGATGTCGTGAGAAGCGTTTTTTGTACACCAAGACTGGATCAATTGGTGATGAAGAGCCCACGTCTTGATGCTCTCTCTGTCGTAGGTGATGCCAGTGGGGACAGTTACGAGATCTCTCATGATTTCAAGCGAGATTGGACAGAGAAAGAAGGGAGGAACATCGATCTCATTTTTCATGAAGCGGAAGGAAAAGAGAGAAAGAATATTGGCTTCTATGTGCCACGAACACTGTTGACTTTATAG 1716 0.4038 MEEVKVEIISKEDIRPSSPTPSHLRIFKHSSLDQIVPVPYVVITLFYTSHNPYEFQQKLELLKQSLSETLTQFYPLGGKIKDDISIDCNDEGANFVVAKVNCSLEKFLSKLDLNSLDKFIPIPFFHEASEGDHVTNIQLSVFDCGGIAIGFCISHRTIDGESLSTFVKVWTERTGRDRNSKPWTEPNFAARSLFPTRTLRFRDLSKEIWGSYFKEGKWATRRFLFTNSTIATLKARILEESSSDPSKNLCPTRVQIVSALLWKCFMAVTKAQFGAQKPSELNHFVNLRRKMEEPMSLNNSIGNFLWLTSAKHMAEHELDLAGLVTKLSNSIQEIDKDFVARLQSEEGSSIMEDSLEKIREAWLNKGEELEQYLFSSWCNFGHHDADDFGWGKPIWVSSVCITTSVHSNTVIFVDTRLKDGIEAWVTLDEKKMKYLESCTELLAYATVDPSPLAMEIHKIVDLVESGGTRSFFEQLGDLVLVDRWFRCGDPFDVVRSVFCTPRLDQLVMKSPRLDALSVVGDASGDSYEISHDFKRDWTEKEGRNIDLIFHEAEGKERKNIGFYVPRTLLTL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120850g00001 571 Gene3D - 216 445 IPR023213 -
Stsc120850g00001 571 PANTHER F21J9.9 7 445 - -
Stsc120850g00001 571 Pfam Transferase family 5 441 - -
Stsc120850g00001 571 Gene3D - 3 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120850g00001 Stsc-Chr120850 12315 15101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120850g00001 4 436 Monolignol Biosynthesis Gene Families AT5G48930 24.628 4.57e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120850g00001 - - aip:107628104 569.696