Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120849g00033 ATGGCTAAAAACTTGATAGCTGATGACATACTCAGTTGTCCTGACTCTCCAGAAAGAATGCAAGGGACATTCGGCTATTTCGCACCCGAGTATGCCATCGTTGGTAGAGCTTCTCTCGAATCTGATGTGTTTAGTTTTGGTGTGGTTCTTCTTGAGCTTATCAGCGGCCGCCAACCAATCCTTAGAACTGCAGGCAGAGAAGAAAGCCTTGTTATATGGGCTACTCCTCGCTTGCAAGATAGCAGGAGGGTAATGGCAGAGTTGATCGATCCGCGGCTGAGAGGAAACTTCCCGGAAGAAGAGGTGCTGGTAATGGCATACTTAGCAAAAGAGTGTTTGCTGTTGGATCCTGACACAAGACCAACCATGAGTGAGGTTGTTCAAATTCTTTCAAGTATTTCTCCAGGCAAATCTAGAAGAAGACTAAGCATTCCACTCAGCCTTTTTCAGGAATCAGAGGATGCAGAGAAGCCAAGGCAAGCCTCATCATCCAGCTTTGCTTCTTGCAATTTCATGTCACAAGATGCTGAAAACAATCTTCATGTTGCTGGGGATGAAAATATGAATGTAGATGCATTTTCACCTGAGTATATGGAGAGTTTGATCCTCTTGACTTCAAAAATTCCTGAGAGCTGTCATGCATCAGAAGAGGAAATGGTAGACCTAACCGAGCCTCGGTTCGAATCGTTTTGTGTGACTAGTGTCGAATTTCCATGA 717 0.4463 MAKNLIADDILSCPDSPERMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPILRTAGREESLVIWATPRLQDSRRVMAELIDPRLRGNFPEEEVLVMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRLSIPLSLFQESEDAEKPRQASSSSFASCNFMSQDAENNLHVAGDENMNVDAFSPEYMESLILLTSKIPESCHASEEEMVDLTEPRFESFCVTSVEFP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120849g00033 238 PANTHER OS01G0750732 PROTEIN 19 159 - -
Stsc120849g00033 238 Pfam Protein tyrosine and serine/threonine kinase 23 130 IPR001245 GO:0004672|GO:0006468
Stsc120849g00033 238 Gene3D Transferase(Phosphotransferase) domain 1 5 144 - -
Stsc120849g00033 238 ProSiteProfiles Protein kinase domain profile. 1 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc120849g00033 238 SUPERFAMILY Protein kinase-like (PK-like) 18 154 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120849g00033 Stsc-Chr120849 244931 246211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120849g00033 1 236 Receptor kinase-like Gene Family AT2G28250 50.417 3.76e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Stsc120849g00033 PK_Tyr_Ser-Thr 8.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120849g00033 - - gmx:100817870 334.724