Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120848g00014 ATGTCCATGGATCCAAAAAAATCAAACAAGATCAGAGAAATCGTTAGGCTTCAACAGATCCTCAAGAAATGGAGAAGGATAGCAAGCAGCAACAACAACAATCACAACAACGATGATGACAACAATAACAACGAGGGAAGCAATAATTTCAGAACAGCTGCTAACACCGGCGGTAGCAGCAGTAGCAGTAGCACGAGCAAAAGCATTAAGTTTCTAAAGAGAACGCTTTCGCTATCGGAACGTGACGTGGCGCAGACGGCGAATAACAGCACCGTTGTTCCGAAAGGGTACTTAGCCATTTGTGTTGGCGAAGAGCTAAAACGGTTCATAATCCCAACGGTTTATTTGGGTCACCAAGCTTTCCAGATTCTTCTCAGAGAAGCAGAGGAAGAATTTGGGTTCCAACAAACCGGTGTTCTTAGGATCCCTTGTGAAGTCTCGGTTTTTGAGAGTATTTTGAAAATGGTTGAAGGAAAAAATAGTAGAAACAATAATAATCAGAAGGACAAGGTTTCAACTACTGCTACTGCTCAAGAATGCAGGCTTAGTGTTGAAGAGATTATGAGTTATTGTTCTTCTTCTTCCTCTGACAATCAACTTGCTTATTCTCACCATCCTCAAAGTCCTTTGTGCAGATAG 639 0.4178 MSMDPKKSNKIREIVRLQQILKKWRRIASSNNNNHNNDDDNNNNEGSNNFRTAANTGGSSSSSSTSKSIKFLKRTLSLSERDVAQTANNSTVVPKGYLAICVGEELKRFIIPTVYLGHQAFQILLREAEEEFGFQQTGVLRIPCEVSVFESILKMVEGKNSRNNNNQKDKVSTTATAQECRLSVEEIMSYCSSSSSDNQLAYSHHPQSPLCR 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120848g00014 212 Pfam Auxin responsive protein 68 156 IPR003676 GO:0009733
Stsc120848g00014 212 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 73 152 IPR003676 GO:0009733
Stsc120848g00014 212 MobiDBLite consensus disorder prediction 29 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120848g00014 Stsc-Chr120848 152045 152974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120848g00014 3 212 Calmodulin-binding Proteins AT4G31320 52.830 1.80e-61 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120848g00014 K14488 - gmx:100799598 233.032