Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120845g00040 ATGGCAGCGTGCTTCTTTGGGGAAATGAGTTACGTGAAACCACCAATGTCTGGTGTCATAAAAGGGATGTTCGTTCCAAAACTGAGTGGTCAAGGTGCCACTGGAGATGCCATTGCCCTTTTGGGTGCCCTTATCATGCCGCACAACCTGTTCCTACACTCTGCTCTGGTGCTGTCTAGGAAAATACTCAATTCAGTTCGTGGCATCAATGAAGCGTGTAGATATTTTCTGATAGAGAGTGGGTTCGCACTGTTTGTGGCATTTCTAATCAACGTTGCAGTAATTTCTGTGTCTGGCACTGTTTGCTCATCTTCAAATCTTTCTTCACAAAACGCTGCTCACTGCTCCGATCTCACCCTTGACTCTGCTTCCTTTCTTCTCAAGAATGTGTTGGGAAGGTCGAGTTCAACGATTTATGCGATAGCACTGTTAGCTTCTGGACAAAGTTCCGCTATTACTGGAACCTATGCAGGACAGTACATTATGCAGGGTTTCTTGGACTTAAAGATGAAAAGATGGCTTAGGAACTTGATGACTAGGACCATTGCCATAGCACCAAGCCTTGTTGTCTCCATTATTGGTGGCTCCTCCGGGGCGGGTCGCCTAATCGTCATCGCATCAATGATACTTTCTTTTGAACTTCCATTCGCTTTAATTCCACTCCTTAAGTTTAGTAGCAGTAGTACCAAGATGGGACCTCACAAGAACTCTATGATAATCATTGTGATATCATGGATCCTAGGATTGGGGATCATAGGCATCAATGTGTACTACCTGGTGACTGCCTTCGTGGGTTGGCTAATGCATAATAGTTTGCCAAAGGTGGGAAAAGTGTTCATTGGGATCATAGTGTTTCCTCTGATGGGAATCTATGTGGGCTCAGTTATATACCTAACATTCAGAAAAGACACTGTTCAGACATATATCGAGACCAAGAATAACACAGCAATGCAAACCCATGTGGAAAAGGGCTTCATGAATCCCAATGGTGAGTTAGAGTTGAACCATGGCCCTATCAGAGAAGATTTAGCTGACATCCCACTACCTGAATAA 1053 0.4416 MAACFFGEMSYVKPPMSGVIKGMFVPKLSGQGATGDAIALLGALIMPHNLFLHSALVLSRKILNSVRGINEACRYFLIESGFALFVAFLINVAVISVSGTVCSSSNLSSQNAAHCSDLTLDSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQYIMQGFLDLKMKRWLRNLMTRTIAIAPSLVVSIIGGSSGAGRLIVIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIVISWILGLGIIGINVYYLVTAFVGWLMHNSLPKVGKVFIGIIVFPLMGIYVGSVIYLTFRKDTVQTYIETKNNTAMQTHVEKGFMNPNGELELNHGPIREDLADIPLPE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120845g00040 350 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 309 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc120845g00040 350 Pfam Natural resistance-associated macrophage protein 1 237 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc120845g00040 350 PRINTS Natural resistance-associated macrophage protein signature 207 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc120845g00040 350 PRINTS Natural resistance-associated macrophage protein signature 37 60 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc120845g00040 350 PRINTS Natural resistance-associated macrophage protein signature 147 166 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc120845g00040 350 PRINTS Natural resistance-associated macrophage protein signature 175 192 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120845g00040 Stsc-Chr120845 205384 212737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120845g00040 1 350 Inorganic Solute Cotransporters AT1G15960 58.571 6.41e-139 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120845g00040 K21398 - gmx:100787785 569.696