Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120845g00010 ATGGAAGGTTTGAGTTCAGATCCATCAATGGATTCGGTTTCGGATAATTCTTGTGATTTAAGCATCACAGAACAGTTTTTTTGTGATGAGCAGTATGTTCCAAAGGTTGGCATGTTTTTTGAGTCACTTGAGAAAGCTAGAGATTTCTACAAGGATTATGCTAAACGGGCAGGGTTTGCTATAAAGATTAGGAACACAAATAAGAGCAAGAAATCAAATGAAATATTGAACCAACTGCTGTCATGTAATAGAGAAGGGAAAAGAAGGTCGGATTTGCCAGTTTCTGAGAAGACAAATCCAGTATATACTACTAATTGTCCAGCCAGAGTCTATGTCCATCATATGAAGTATTATGATTTCTGGCAGATTTCGAAAGTGGTTTTGGAACATTCACACCCATGCTCTCCGAATCATGCAGTAATGTATCCTCAATATCGAGAGCTCAACATGCATGTCCGCCATACAATTGAGATTAATGATTAA 483 0.3768 MEGLSSDPSMDSVSDNSCDLSITEQFFCDEQYVPKVGMFFESLEKARDFYKDYAKRAGFAIKIRNTNKSKKSNEILNQLLSCNREGKRRSDLPVSEKTNPVYTTNCPARVYVHHMKYYDFWQISKVVLEHSHPCSPNHAVMYPQYRELNMHVRHTIEIND 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120845g00010 160 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 157 - -
Stsc120845g00010 160 Pfam FAR1 DNA-binding domain 48 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120845g00010 Stsc-Chr120845 35696 36923 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc120845g00010 FAR1 2.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120845g00010 - - aip:110271906 154.836