LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc120845g00008	ATGCTTCTTACTTGGGCTACTCGGATTGTCTTCAGTTTTATGGCACAGGCTTTTGGGTACGCTGGTATTAACTACAGTTCAGCTACACTCAGCACTGCATTGCTCAACCTTGTTCCTGGCTTTACCTTTGTACTTGCCGTTCTTTTCAGGTTGGAACAATTTGATTGGAGAAACTCTAGTAGCTTAGCTAAATCATTAGGAACAATAGTATCGATTGCCGGTGCATTCGTTGCGACTTTGTACATGGGCCCTGCAATTCTGACGGGACTATCGCATGCTAACTCATCTCTGCAGCCACTTTTGTCACAAGATCCCAACTGGATACTCGGAGGATTATTTCTTGCAGTGGATTGTGTTATGGCTTCGGCATTTATAATCGTACAGGCTTATGTTCTTAAGAAATTTCCAGCGGAGTTTATTGTTGTGTTCTTTTATTGTTTCTTCGTGGCCATTCAATCTGCTGTGACCTGTTTAGTTATGGAAAGAGACATCAGTGCTTGGAGCTTGGAACCGAAGCAAAGATTGCTCACAGTTCTATACTCGGCAGTCTTTGGTTCTGTCTTTCAAGTTAGTGTCACTACTTGGTGTTTGCGCCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCCATAGGAATCGTCATATCGGTGGTCATAGGCGTTGCTTTCCTCGGCGATGCATTCTATCTCGGAAGTTTGGTTGGTGCTACTGTGATTGTTGTTGGGTTTTATTCTGTACTGTGGGGAAAAGCCAGAGATATTGAACAAGTTAGCTTGGAATCAAGAGGGAAACAAACCCCTCTTTTGAAAGAAAACAACACTGAAGAGATATAG	834	0.4305	MLLTWATRIVFSFMAQAFGYAGINYSSATLSTALLNLVPGFTFVLAVLFRLEQFDWRNSSSLAKSLGTIVSIAGAFVATLYMGPAILTGLSHANSSLQPLLSQDPNWILGGLFLAVDCVMASAFIIVQAYVLKKFPAEFIVVFFYCFFVAIQSAVTCLVMERDISAWSLEPKQRLLTVLYSAVFGSVFQVSVTTWCLRQTGPVFVSMFKPIGIVISVVIGVAFLGDAFYLGSLVGATVIVVGFYSVLWGKARDIEQVSLESRGKQTPLLKENNTEEI	277

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc120845g00008	277	PANTHER	WAT1-RELATED PROTEIN	11	254	IPR030184	GO:0016020\|GO:0022857
	Stsc120845g00008	277	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	167	251	-	-
	Stsc120845g00008	277	Pfam	EamA-like transporter family	110	247	IPR000620	GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc120845g00008	Stsc-Chr120845	23537	26658	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc120845g00008	19	265	Nodulin-like Gene Family	AT3G28050	47.177	3.45e-75	232

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc120845g00008	-		-	gmx:100804932	411.379