Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120845g00006 ATGGGGAAGTTGGTACTCCCATTTGTGGGGATGATTATGTCCGAACTTGCTCAGGTTGGCTTGATCATACTCAGCAAGCAAGTCATGGCTAAAGGAATGTCCAACTTCATCTTCATCTTTTACTCCAACTCCCTTGCTTCCCTCATTCTTCTCCCTTCTTCCTTCTTCATCCACAGATTTAACCGCCCTCCAATTACCTTCTCCACCATTATTGGATGCTTCTTACTTGGGCTACTCGGTTTTATGGCACAGGCTTTTGGGTACGCTGGTATTAACTACAGTTCAGCTACACTCAGCACTGCATTGCTCAACCTTGTTCCTGGCTTTACCTTTGTACTTGCCGTTCTTTTCAGGTTGGAACAATTTGATTGGAGAAACTCTAGTAGCTTAGCTAAATCATTAGGAACAATAGTATCGATTGCCGGTGCATTCGTTGCGACTTTGTACATGGGCCCTGCAATTCTGACGGGACTATCGCATGCTAACTCATCTCTGCAGCCACTTTTGTCACAAGATCCCAACTGGATACTCGGAGGATTATTTCTTGCAGTGGATTGTGTTATGGCTTCGGCATTTATAATCGTACAGGCTTATGTTCTTAAGAAATTTCCAGCGGAGTTTATTGTTGTGTTCTTTTATTGTTTCTTCGTGGCCATTCAATCTGCTGTGACCTGTTTAGTTATGGAAAGAGACATCAGTGCTTGGAGCTTGGAACCGAAGCAAAGATTGCTCACAGTTCTATACTCGGTAACCAAGATAGTAATGAATTAA 771 0.4306 MGKLVLPFVGMIMSELAQVGLIILSKQVMAKGMSNFIFIFYSNSLASLILLPSSFFIHRFNRPPITFSTIIGCFLLGLLGFMAQAFGYAGINYSSATLSTALLNLVPGFTFVLAVLFRLEQFDWRNSSSLAKSLGTIVSIAGAFVATLYMGPAILTGLSHANSSLQPLLSQDPNWILGGLFLAVDCVMASAFIIVQAYVLKKFPAEFIVVFFYCFFVAIQSAVTCLVMERDISAWSLEPKQRLLTVLYSVTKIVMN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120845g00006 256 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 146 - -
Stsc120845g00006 256 Pfam EamA-like transporter family 21 146 IPR000620 GO:0016020
Stsc120845g00006 256 PANTHER WAT1-RELATED PROTEIN 7 250 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120845g00006 Stsc-Chr120845 23537 26658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120845g00006 3 249 Nodulin-like Gene Family AT3G28050 44.578 1.37e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120845g00006 - - gmx:100804932 392.504