Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120845g00005 ATGGGGAAGTTGGTACTCCCATTTGTGGGGATGATTATGTCCGAACTTGCTCAGGTTGGCTTGATCATACTCAGCAAGCAAGTCATGGCTAAAGGAATGTCCAACTTCATCTTCATCTTTTACTCCAACTCCCTTGCTTCCCTCATTCTTCTCCCTTCTTCCTTCTTCATCCACAGATTTAACCGCCCTCCAATTACCTTCTCCACCATTATTGGATGCTTCTTACTTGGGCTACTCGGTTTTATGGCACAGGCTTTTGGGTACGCTGGTATTAACTACAGTTCAGCTACACTCAGCACTGCATTGCTCAACCTTGTTCCTGGCTTTACCTTTGTACTTGCCGTTCTTTTCAGGTTGGAACAATTTGATTGGAGAAACTCTAGTAGCTTAGCTAAATCATTAGGAACAATAGTATCGATTGCCGGTGCATTCGTTGCGACTTTGTACATGGGCCCTGCAATTCTGACGGGACTATCGCATGCTAACTCATCTCTGCAGCCACTTTTGTCACAAGATCCCAACTGGATACTCGGAGGATTATTTCTTGCAGTGGATTGTGTTATGGCTTCGGCATTTATAATCGTACAGGCTTATGTTCTTAAGAAATTTCCAGCGGAGTTTATTGTTGTGTTCTTTTATTGTTTCTTCGTGGCCATTCAATCTGCTGTGACCTGTTTAGTTATGGAAAGAGACATCAGTGCTTGGAGCTTGGAACCGAAGCAAAGATTGCTCACAGTTCTATACTCGGCAGTCTTTGGTTCTGTCTTTCAAGTTAGTGTCACTACTTGGTGTTTGCGCCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCCATAGGAATCGTCATATCGGTGGTCATAGGCGTTGCTTTCCTCGGCGATGCATTCTATCTCGGAAGTTTGGTTGGTGCTACTGTGATTGTTGTTGGGTTTTATTCTGTACTGTGGGGAAAAGCCAGAGATATTGAACAAGTTAGCTTGGAATCAAGAGGGAAACAAACCCCTCTTTTGAAAGAAAACAACACTGAAGAGATATAG 1038 0.4355 MGKLVLPFVGMIMSELAQVGLIILSKQVMAKGMSNFIFIFYSNSLASLILLPSSFFIHRFNRPPITFSTIIGCFLLGLLGFMAQAFGYAGINYSSATLSTALLNLVPGFTFVLAVLFRLEQFDWRNSSSLAKSLGTIVSIAGAFVATLYMGPAILTGLSHANSSLQPLLSQDPNWILGGLFLAVDCVMASAFIIVQAYVLKKFPAEFIVVFFYCFFVAIQSAVTCLVMERDISAWSLEPKQRLLTVLYSAVFGSVFQVSVTTWCLRQTGPVFVSMFKPIGIVISVVIGVAFLGDAFYLGSLVGATVIVVGFYSVLWGKARDIEQVSLESRGKQTPLLKENNTEEI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120845g00005 345 PANTHER WAT1-RELATED PROTEIN 7 322 IPR030184 GO:0016020|GO:0022857
Stsc120845g00005 345 Pfam EamA-like transporter family 22 146 IPR000620 GO:0016020
Stsc120845g00005 345 Pfam EamA-like transporter family 178 315 IPR000620 GO:0016020
Stsc120845g00005 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120845g00005 Stsc-Chr120845 23537 26658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120845g00005 3 345 Nodulin-like Gene Family AT3G28050 44.638 2.09e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120845g00005 - - gmx:100804932 532.717