Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120844g00041 ATGGGGACTGGGGAAGAAAGCACAGCTAAACCTTCTAAACCATCTTCTATGACTCAGGAGATTGCACCAGCTCCTTCTTATCCTGATTGGTCAAGCTCCATGCAGGCTTATTATGCCCCTGGAGCCACTCCACCTCCTTTTTACGCCTCAACTGTTGCTTCTGCAGCTCCCCACCCCTATCTGTGGGGAGGACAGCATCCTCTAATTCCACCATATGGTACTCCTGTTCCATATCCAGCTATATATCCTCCTGGGAGTGTCTATGCTCATCCTAGCATGGCAACGACTCCTAGTGCCACACAGACAGAGTTTGTAGGCAAGGGACCCAATGGAAAAGATCGGACTTCTGCCAAAAACTCGAAGGGAACTTCTGCCAATAATGGTTCTAAAGCAGGAGACAATGGAAAAGCAGGTTCAGGGTCAGGAAATGATGGCATCTCACAAAGTGGTGAAAGCGGTTCTGAGGGATCATCTGATGACAGTGATGAGAAGGAATCGGCTGCAAACAAGAAAGGAAGCTTTGACAAAATGCTTGCTGATGGAGCCAATGCACAAAACAATGCCGTTACTCAATCTTCTGGAAAGGCTGCAATGGCTGCAACTAATCTTAATATTGGAATGGACTTGTGGAATGCATCTTCTGCAGGTGCTGATGCTACAAAACTGAGAAACAATCAACCCGCCGCCCCAGGAGCCGTCGCCCCTCCCACAATAATGGGACGTGAAGTTGCACTTGGTGAACAGTGGATACAAGACGAGCGCGAACTGAAGAGACAGAAAAGGAAACAGTCTAACAGAGAGTCAGCTAGAAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGTTGCAAAAGAAGGTGGAGTCACTGGGAAACGAGAACCGAACTCTGAGAGAAGAGCTTCAGAGAGTATCAGAAGAATGCGAGAAGCTTACAGCTGAAAATAATTCCATCAAGGAAGAGTTGGAGAGGTTATGTGGGCCAGAGGCAGTTGCCAGCCTTGAATAA 1008 0.4792 MGTGEESTAKPSKPSSMTQEIAPAPSYPDWSSSMQAYYAPGATPPPFYASTVASAAPHPYLWGGQHPLIPPYGTPVPYPAIYPPGSVYAHPSMATTPSATQTEFVGKGPNGKDRTSAKNSKGTSANNGSKAGDNGKAGSGSGNDGISQSGESGSEGSSDDSDEKESAANKKGSFDKMLADGANAQNNAVTQSSGKAAMAATNLNIGMDLWNASSAGADATKLRNNQPAAPGAVAPPTIMGREVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKKVESLGNENRTLREELQRVSEECEKLTAENNSIKEELERLCGPEAVASLE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120844g00041 335 MobiDBLite consensus disorder prediction 255 279 - -
Stsc120844g00041 335 SMART brlzneu 253 317 IPR004827 GO:0003700|GO:0006355
Stsc120844g00041 335 Pfam bZIP transcription factor 253 315 IPR004827 GO:0003700|GO:0006355
Stsc120844g00041 335 Pfam G-box binding protein MFMR 2 93 IPR012900 -
Stsc120844g00041 335 MobiDBLite consensus disorder prediction 1 27 - -
Stsc120844g00041 335 Gene3D - 256 310 - -
Stsc120844g00041 335 MobiDBLite consensus disorder prediction 157 171 - -
Stsc120844g00041 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 260 275 IPR004827 GO:0003700|GO:0006355
Stsc120844g00041 335 PRINTS cAMP response element binding (CREB) protein signature 252 268 - -
Stsc120844g00041 335 PRINTS cAMP response element binding (CREB) protein signature 290 307 - -
Stsc120844g00041 335 PRINTS cAMP response element binding (CREB) protein signature 158 180 - -
Stsc120844g00041 335 PRINTS cAMP response element binding (CREB) protein signature 270 290 - -
Stsc120844g00041 335 MobiDBLite consensus disorder prediction 96 195 - -
Stsc120844g00041 335 FunFam BZIP transcription factor 255 306 - -
Stsc120844g00041 335 SUPERFAMILY Leucine zipper domain 256 312 IPR046347 GO:0003700|GO:0006355
Stsc120844g00041 335 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 331 IPR044827 GO:0003700|GO:0006355|GO:0043565
Stsc120844g00041 335 Coils Coil 266 321 - -
Stsc120844g00041 335 CDD bZIP_plant_GBF1 258 308 IPR045314 GO:0003700|GO:0006355
Stsc120844g00041 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 255 318 IPR004827 GO:0003700|GO:0006355
Stsc120844g00041 335 MobiDBLite consensus disorder prediction 113 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120844g00041 Stsc-Chr120844 246925 249699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120844g00041 1 335 bZIP Transcription Factor Family AT4G36730 51.613 7.02e-104 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc120844g00041 MFMR 3.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120844g00041 K09060 - gmx:547788 484.182