Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc120844g00028 | ATGGAGAGCGTTTCTGGGAGAGAAGATGCAACAGACGAGATTATACAGTACTCATGTGATGTTGACGAGGAATTCGTCCCCAAGGTTGGAATGTGGTTTGAAAGCGTTGAGAAAGCTGGACAATTCTATAAGGAGTATGCGAAACGTGCAGGTTTCTCCACAAAGATAAGGAACTCAAATAGATGTAAGGAGACCAAGGAAATAAAGAACCAACTAATCACTTGCAATAGAGAAGGGAGATGGACATCTGAAGTACCTTGTGTAGAGAAGACGAATCCGATATGTGGTGCAAATTGTCCAGCACGAATTTATGTTCACATAGACAAGAAGAGTTGA | 336 | 0.4167 | MESVSGREDATDEIIQYSCDVDEEFVPKVGMWFESVEKAGQFYKEYAKRAGFSTKIRNSNRCKETKEIKNQLITCNREGRWTSEVPCVEKTNPICGANCPARIYVHIDKKS | 111 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc120844g00028 | 111 | Pfam | FAR1 DNA-binding domain | 41 | 109 | IPR004330 | - | |
Stsc120844g00028 | 111 | PANTHER | FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED | 8 | 108 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc120844g00028 | Stsc-Chr120844 | 185345 | 186101 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Stsc120844g00028 | FAR1 | 3.1e-10 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc120844g00028 | - | - | aip:107636690 | 122.094 |