Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120844g00028 ATGGAGAGCGTTTCTGGGAGAGAAGATGCAACAGACGAGATTATACAGTACTCATGTGATGTTGACGAGGAATTCGTCCCCAAGGTTGGAATGTGGTTTGAAAGCGTTGAGAAAGCTGGACAATTCTATAAGGAGTATGCGAAACGTGCAGGTTTCTCCACAAAGATAAGGAACTCAAATAGATGTAAGGAGACCAAGGAAATAAAGAACCAACTAATCACTTGCAATAGAGAAGGGAGATGGACATCTGAAGTACCTTGTGTAGAGAAGACGAATCCGATATGTGGTGCAAATTGTCCAGCACGAATTTATGTTCACATAGACAAGAAGAGTTGA 336 0.4167 MESVSGREDATDEIIQYSCDVDEEFVPKVGMWFESVEKAGQFYKEYAKRAGFSTKIRNSNRCKETKEIKNQLITCNREGRWTSEVPCVEKTNPICGANCPARIYVHIDKKS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120844g00028 111 Pfam FAR1 DNA-binding domain 41 109 IPR004330 -
Stsc120844g00028 111 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120844g00028 Stsc-Chr120844 185345 186101 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc120844g00028 FAR1 3.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120844g00028 - - aip:107636690 122.094